Gene Rcas_2898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2898 
Symbol 
ID5540388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3759768 
End bp3760334 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content61% 
IMG OID640895019 
Productsugar isomerase (SIS) 
Protein accessionYP_001432978 
Protein GI156742849 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTCG ACCAGTATCT CACATCACTG GCAGCAACAC TCGCAGCCGT TCCTCGCGAG 
CCGTTGCGCG CGGTCGAAGA GGCGTTGTGG CAGACATACC TGCGCGATGG GACGATCATT
ATCTGCGGGA ACGGCGGCAG CGCCGCGAAT GCCTCGCATT TTGCATGCGA TTTGGCAAAA
TGGACGCTTA CAGATGGCCG TCGGCGTGTG CGCGCCATTG CGTTGACCGA TAACGTACCG
GTGATGACCG CCTGGTCGAA CGATTCCGCG TATGAGCGTG TCTTTGTTGA GCAGGTCATA
TCGCTCTATC GTCCTGGCGA CACGCTCGTG GCAATTTCGG GGAGCGGCAA TTCGCCAAAT
GTGCTGCGCG CGGTCGAATG GATGGCAGCG CAAGGCGCCA CCACCATCGG GTTGACCGGT
TTCGCGGGCG GCAAACTGGC GGGTCTGGCG CAGATCGTGG TTGTGGTTCC CAGCCATTGT
ATGCCCGAAG TCGAAGACGC TCACTCCGCC ATCTGCCATA GCCTGGCGGT GGCGCTTGGT
GAGCGGATCA GCGCCGAACC GGTATGA
 
Protein sequence
MRVDQYLTSL AATLAAVPRE PLRAVEEALW QTYLRDGTII ICGNGGSAAN ASHFACDLAK 
WTLTDGRRRV RAIALTDNVP VMTAWSNDSA YERVFVEQVI SLYRPGDTLV AISGSGNSPN
VLRAVEWMAA QGATTIGLTG FAGGKLAGLA QIVVVVPSHC MPEVEDAHSA ICHSLAVALG
ERISAEPV