Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2898 |
Symbol | |
ID | 5540388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3759768 |
End bp | 3760334 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895019 |
Product | sugar isomerase (SIS) |
Protein accession | YP_001432978 |
Protein GI | 156742849 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0279] Phosphoheptose isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGTCG ACCAGTATCT CACATCACTG GCAGCAACAC TCGCAGCCGT TCCTCGCGAG CCGTTGCGCG CGGTCGAAGA GGCGTTGTGG CAGACATACC TGCGCGATGG GACGATCATT ATCTGCGGGA ACGGCGGCAG CGCCGCGAAT GCCTCGCATT TTGCATGCGA TTTGGCAAAA TGGACGCTTA CAGATGGCCG TCGGCGTGTG CGCGCCATTG CGTTGACCGA TAACGTACCG GTGATGACCG CCTGGTCGAA CGATTCCGCG TATGAGCGTG TCTTTGTTGA GCAGGTCATA TCGCTCTATC GTCCTGGCGA CACGCTCGTG GCAATTTCGG GGAGCGGCAA TTCGCCAAAT GTGCTGCGCG CGGTCGAATG GATGGCAGCG CAAGGCGCCA CCACCATCGG GTTGACCGGT TTCGCGGGCG GCAAACTGGC GGGTCTGGCG CAGATCGTGG TTGTGGTTCC CAGCCATTGT ATGCCCGAAG TCGAAGACGC TCACTCCGCC ATCTGCCATA GCCTGGCGGT GGCGCTTGGT GAGCGGATCA GCGCCGAACC GGTATGA
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Protein sequence | MRVDQYLTSL AATLAAVPRE PLRAVEEALW QTYLRDGTII ICGNGGSAAN ASHFACDLAK WTLTDGRRRV RAIALTDNVP VMTAWSNDSA YERVFVEQVI SLYRPGDTLV AISGSGNSPN VLRAVEWMAA QGATTIGLTG FAGGKLAGLA QIVVVVPSHC MPEVEDAHSA ICHSLAVALG ERISAEPV
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