| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2893 |
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| Symbol | |
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| ID | 5540382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3752933 |
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| End bp | 3754357 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895013 |
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| Product | PUCC protein |
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| Protein accession | YP_001432973 |
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| Protein GI | 156742844 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00562586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACTG GAACCCAACG ACTGGCAGGA CTGGCGCAGC GGGTTGGCGC ATGGGTAAGC
GATCATCAGG CGATACGATG GTGGCTGAGT GTTCTGCGCC TGGGGCTTTT TCAACTTGGC
ATGGGAATTG CGCTGGCGCC GATCACCGGT ACGCTCAACC GCGTGTTGAT CGGTGATTTG
TATGTTCCTG CCGCGATTGT CGCGTCGCTC ATGGCGATTC ACTACTTTGT CTCGCCGGTG
CGCGCCATCT TTGGCTATCA GTCGGATGTG CATCGCGCGA AGGGGCGCTG GCGCACGCCG
TATGTGGTCC TGGGCGCGGT GCTGACGTAT GGCGGTCTGG CGACCGCGCC GTTTTCGTTG
ATCCTGCTGG GTCCCGATAG TTCGATGCCC TTTGCGGTTG CGCTCGTCGT TTGCGCTGCC
ATCTTTCTGG CATATGGCAT TGGCGTCAAT ATTGTCGAGA CGACGTATCT AGCGTTGGTC
AGTGATATTA CGCCGCCGCG CGAACGGGGC AAGGTGCTGG CAGTGTTATG GATGATGCTG
GTCGTCGGGA CGATTGTCAG TTCGATCATT GTTGGCGCCA TTCTCGAAAA CTATTCACCG
GTGCTGTTGA TCCAGGTAAT GCAGGGTTCG GCGGTGGTCT TCGCGGTTCT GACCGCGATC
TCTCTGCTTG GGCGCGAGCG ATTGCGCGCG GATGGGACGC TCGTCAGTCA TACCGATGAG
ATTCGGGTGC GGTTGACGCT GGTCGAGCAA CTGCGCGTGG TCTGGCAGCA GCCTGGATTG
CGTGCGTTGT TCGTCGTTCT GTTTGGCGGA ACGCTGGCGC TCGCCACGCA CGATGTGCTC
CTGGAGCCGT ATGGCGGTCA GGTGCTGGGC ATGAGCGTCG CAGCGACGAC CCGGTTGACG
GCGCTCTGGG GTGTGGCAAT GATTACAGGC ATCACGGTGG CAGGTCTGCT TCTGTGGCGT
GGGCAGTCGC CTATCAGCCT GATAATTGGT GGATGCGCCG TTGGCGCTTT GGGTTTTCTG
GTCGTTATTG CCGCCGGCGG GAGCCTCGAT GTGACTGTGT TTCGCGGCGG CGTGGTCTTT
ATTGGCATCG GGCGCGGGTT GTTCATCGTT GCTTCGGTGG CGCTGATCAT GACGCTTGCG
GATCGGGCGC ACGCCGGGTT GTTCATTGGT TTGTGGGGTG TGACGCAGGC GCTGGCGCAG
GGGTTTGGCA CTGTGGGCGG CGGTCTGGCG CGTGATATTG TTCAGTTGCA AACCGGCAGT
ATTCTGCTGG GGTATACCGT AGTTTACGCG ACATCGCTCG TCATTCTCCT GATTACGCTT
GGCTTGATCG CGGCATTGCG CCTGGGTCGC CAGTTGCGCG AGGGTACGGT TCGTTCGCCG
TGGTCGGGAT TGCAGGATTT GCCCGGTGAT CAGATTCTGT TCTGA
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| Protein sequence | MATGTQRLAG LAQRVGAWVS DHQAIRWWLS VLRLGLFQLG MGIALAPITG TLNRVLIGDL
YVPAAIVASL MAIHYFVSPV RAIFGYQSDV HRAKGRWRTP YVVLGAVLTY GGLATAPFSL
ILLGPDSSMP FAVALVVCAA IFLAYGIGVN IVETTYLALV SDITPPRERG KVLAVLWMML
VVGTIVSSII VGAILENYSP VLLIQVMQGS AVVFAVLTAI SLLGRERLRA DGTLVSHTDE
IRVRLTLVEQ LRVVWQQPGL RALFVVLFGG TLALATHDVL LEPYGGQVLG MSVAATTRLT
ALWGVAMITG ITVAGLLLWR GQSPISLIIG GCAVGALGFL VVIAAGGSLD VTVFRGGVVF
IGIGRGLFIV ASVALIMTLA DRAHAGLFIG LWGVTQALAQ GFGTVGGGLA RDIVQLQTGS
ILLGYTVVYA TSLVILLITL GLIAALRLGR QLREGTVRSP WSGLQDLPGD QILF
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