Gene Rcas_2885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2885 
Symbol 
ID5540374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3743704 
End bp3744117 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content47% 
IMG OID640895005 
Producthypothetical protein 
Protein accessionYP_001432965 
Protein GI156742836 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTACC CTGTTGTCAT CCATAAGGAT ACTGAAAGCG ATTATGGCGT TACTGTGCCT 
GACTTGCCTG GTTGCTTCAG TGCGGGTGAA ACACTCGATG AAGCATTGCA AGAAGCCATC
GAAGCCATTG AGTGCCATCT AGAAGGCTTA TTAGCAGATG GCGAGCCTAT CCCAACGCCA
AAACCGGTTG AATTGCATCA AAGTAATCCC GATTATGCCG GAGGGATCTG GGCATTCGTT
ACTGTTGATG TTACAAAGCT ATCAGGTAAA ACGCGCAGGA TCAATATTAC GTTGCCTGAG
CGTGTATTAC ATCTCGTGAA TAAATATGCG AGTGAACGTG GTGAGAGTCG TTCAGGGTTG
ATAACCCAGG CGGTGCTTGA ATATATTGGG TCCCGTGAAA CGCTCGCTCG TTAA
 
Protein sequence
MHYPVVIHKD TESDYGVTVP DLPGCFSAGE TLDEALQEAI EAIECHLEGL LADGEPIPTP 
KPVELHQSNP DYAGGIWAFV TVDVTKLSGK TRRINITLPE RVLHLVNKYA SERGESRSGL
ITQAVLEYIG SRETLAR