Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2885 |
Symbol | |
ID | 5540374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3743704 |
End bp | 3744117 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640895005 |
Product | hypothetical protein |
Protein accession | YP_001432965 |
Protein GI | 156742836 |
COG category | [S] Function unknown |
COG ID | [COG1598] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTACC CTGTTGTCAT CCATAAGGAT ACTGAAAGCG ATTATGGCGT TACTGTGCCT GACTTGCCTG GTTGCTTCAG TGCGGGTGAA ACACTCGATG AAGCATTGCA AGAAGCCATC GAAGCCATTG AGTGCCATCT AGAAGGCTTA TTAGCAGATG GCGAGCCTAT CCCAACGCCA AAACCGGTTG AATTGCATCA AAGTAATCCC GATTATGCCG GAGGGATCTG GGCATTCGTT ACTGTTGATG TTACAAAGCT ATCAGGTAAA ACGCGCAGGA TCAATATTAC GTTGCCTGAG CGTGTATTAC ATCTCGTGAA TAAATATGCG AGTGAACGTG GTGAGAGTCG TTCAGGGTTG ATAACCCAGG CGGTGCTTGA ATATATTGGG TCCCGTGAAA CGCTCGCTCG TTAA
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Protein sequence | MHYPVVIHKD TESDYGVTVP DLPGCFSAGE TLDEALQEAI EAIECHLEGL LADGEPIPTP KPVELHQSNP DYAGGIWAFV TVDVTKLSGK TRRINITLPE RVLHLVNKYA SERGESRSGL ITQAVLEYIG SRETLAR
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