| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2880 |
|---|
| Symbol | |
|---|
| ID | 5540369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 3737821 |
|---|
| End bp | 3738585 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640895000 |
|---|
| Product | phosphopantetheinyl transferase-like protein |
|---|
| Protein accession | YP_001432960 |
|---|
| Protein GI | 156742831 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2091] Phosphopantetheinyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTACT GGCTGACTCA GACGCTTGCC GATCACCCCG CACTTGCCCG CGCTGAAGCC
CCTGAAGGAT TGCTCAGCGG TGCGGAAGAG GCGCAGTTTG GGGCGCTGAT CCGCGAGAAA
CGCCGCCGCG ACTGGCTGCT GGGGCGCTGG ACGGCAAAGC ATCTGGCAGC ACACTATATC
GAACTGGTCA CCGGACGGCG TCCCGCGCTG CGGGACATTG TCATTCTTAC CGACCCGGAC
GGCGCGCCGC GTCTTCAGAG TCAGAATGGC GACGCTTCGA TCATTGATCG ACTGGCGATC
TCGATCAGCC ACAGCCGCGA CCACGCCTTT TGTGTGCTGA CCGACATACC AGGGTACGCC
CCAGGCGCCG ACATCGAGTA TGTCGAACCG CGCGCTCCCG GCTTTGTGAC TGATTTCTTC
ACCGACGTCG AAATCGCATG TGTGCATCAT GCGCCGCCGT CGGCGCAGCC GTTGTTGACG
ACTGTCATCT GGAGCGCCAA AGAAGCCGCG CTCAAATCGC TGCGTTGCGG TCTGACGGTC
GATACGCGCC GGATTGTCTG CCTGCCGGAC GAACCAACCG CCGATGGATG GGCGCCGGTG
ATCGTCCGGT GCCACCCCGA ACTGAACGCA TATGTTCATC GTGGCTGGTG GCGTCAGATG
GGCGGATTTG TCCTGACCCT CGCAACAGCG GACATCGGGC GCCCGATGAA AACTGCTGTT
CCTATTGCAG AAGCACGACG GAATGGAGAT GGAGTTTCCC CATGA
|
|---|
| Protein sequence | MLYWLTQTLA DHPALARAEA PEGLLSGAEE AQFGALIREK RRRDWLLGRW TAKHLAAHYI
ELVTGRRPAL RDIVILTDPD GAPRLQSQNG DASIIDRLAI SISHSRDHAF CVLTDIPGYA
PGADIEYVEP RAPGFVTDFF TDVEIACVHH APPSAQPLLT TVIWSAKEAA LKSLRCGLTV
DTRRIVCLPD EPTADGWAPV IVRCHPELNA YVHRGWWRQM GGFVLTLATA DIGRPMKTAV
PIAEARRNGD GVSP
|
|---|
| |