| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2866 |
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| Symbol | |
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| ID | 5540355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3716862 |
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| End bp | 3717692 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640894990 |
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| Product | integron integrase |
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| Protein accession | YP_001432950 |
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| Protein GI | 156742821 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGGACC GCGTACGACA GACGCTGCGC AGAAAGCACT CCTCCTATCG CACGGAGCAG
GCCTACGTCC ATTGGATCAA GCGCTTTATC TTCTTCCACA ACAAGCGCCA CCCCGCCGAG
ATGGGCGCCC CCGAGATCGA GGCGTTCCTC ACCCGCCTGG CTGTCAAGGA GAACGTGGCC
GCCAGCACAC AGAATCAGGC CCTTCAGTCC ATCCTCTTCC TCTATCGTGA AGTGCTCCGC
CAACCCGTCG AGGAGCCCAT CCACGCCCTC CGCGCCAAGA AGCCCAAACG CATCCCTACC
GTGCTCACCC GCCAGGAGGT CCAGCAGCTC TTCGCCCACC TCTCCGGCGC CCGCCTGCTG
ATGGTGCGCC TGCTCTACGG CAGCGGACTC CGCCTTATGG AGTGCCTCCG ACTGCGCGTC
AAAGACCTCG ATTTCCCCTA TCAGACCATC ACCGTGCGCG ATGGGAAGGG AGAGAACGAT
CGCGTGACGG TCCTGCCGAC TTCCCTCGTC CAGCCCCTCC AGGCCCATCT CGAGCAGGTC
CGCCAGCAGC ATGAGGGGGA TCTGGCACAG GGATACGGCG CCGTCTCCCT GCCCGACGCG
CTGGCCCGCA CGTATCCCCA CGCGGAGCGG GAGTGGGCAT GGCAGTGGAT GTTCCCCTCT
CCTCGCCGCT CCGCCGACCC CCGCTCAGGC GCGATCTGCC GTCACCCCAT GGACCTGGCA
ATGCTTCAGC GGGCGGTGCG TCACGCAGCC CGAGCCGCTG GCCTGACAAA GCCGGTCACC
CCGCACACGC TGCGCCATTC CCGCTACCCA TCTCCCGGAG GACGGATATG A
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| Protein sequence | MLDRVRQTLR RKHSSYRTEQ AYVHWIKRFI FFHNKRHPAE MGAPEIEAFL TRLAVKENVA
ASTQNQALQS ILFLYREVLR QPVEEPIHAL RAKKPKRIPT VLTRQEVQQL FAHLSGARLL
MVRLLYGSGL RLMECLRLRV KDLDFPYQTI TVRDGKGEND RVTVLPTSLV QPLQAHLEQV
RQQHEGDLAQ GYGAVSLPDA LARTYPHAER EWAWQWMFPS PRRSADPRSG AICRHPMDLA
MLQRAVRHAA RAAGLTKPVT PHTLRHSRYP SPGGRI
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