| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2818 |
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| Symbol | |
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| ID | 5540305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3654629 |
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| End bp | 3655306 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894945 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001432907 |
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| Protein GI | 156742778 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGATA CAAGCCTGGT CAAAGCCAAA ATCATCAACC TTGACAACCC CTCACAAGAG
GTCGAGTGTC TGTTCAACCC GAAGGAGTAC ACCTTCACCA AGCAGAATAG CTGGAGCCGC
GGCGAAACAC CCAGCACCAA CGTGCCACAA CTCGAATTCA GCGGCGGGCA ACCGGCAACC
CTGTCGATGC ACCTGCTGTT CGACACCTAC ACAAGTGCGC GCCCCGGATC GAAACCGAAG
GATGTGCGCA AAGTGTACAC CGACAAACTC TGGTCGTTTA TGATGATCGA CCCGGACTTG
AAAGACCCCA AGAGCACCCG CGGACGCCCG CCGAAAGTGC GCTTTCAGTG GGGCGCCTCC
TGGTCGTTCA AAGCGGTCAT CACCAACATC ACCCAGAAGT TCACGTTGTT TCTCGTCGAT
GGAACACCGG TGCGCGCTGA ACTTGACGTA ACATTTCAGC AGATTGAAGA CACCGCCAAT
CTGCAACCGC AGAACCCGAC GTCTGGCGGC ATTGGCGGTG AGCGGGTCTG GCGGGTGCGT
GAAGGCGACA CACTGGCATG GATTGCATAT AAATCGTATG GCGATGCGAC GCGCTGGCGC
CCGATCGCCG AAGCGAACGG TCTGGAACGG GTGCGCGAGT TGACGCCAGG AGCAGTGCTG
GTGATCCCCA ATGAGTAA
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| Protein sequence | MPDTSLVKAK IINLDNPSQE VECLFNPKEY TFTKQNSWSR GETPSTNVPQ LEFSGGQPAT
LSMHLLFDTY TSARPGSKPK DVRKVYTDKL WSFMMIDPDL KDPKSTRGRP PKVRFQWGAS
WSFKAVITNI TQKFTLFLVD GTPVRAELDV TFQQIEDTAN LQPQNPTSGG IGGERVWRVR
EGDTLAWIAY KSYGDATRWR PIAEANGLER VRELTPGAVL VIPNE
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