| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2817 |
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| Symbol | |
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| ID | 5540304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3652855 |
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| End bp | 3654636 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640894944 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001432906 |
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| Protein GI | 156742777 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACA ATAACAATGA TCGGCATGTT TCCGATTTTT ACCTGAAACT CGACGGCGCC
GACGCGCCGC TGGAACTGGT GCGGGACATC CTGGACATCA CGATCGAGAA CAGTCTGCAC
CTGCCGGATG TCGCTACGCT CGTCATCAAC GACCGCCGTT TGACGTGGGT TGATGACAGC
CGCCTGGCGC CGGGCAAGAC GCTTGTGGTG AATGTCCGGC GCAATCGCGC AACCGAGACG
ATCTTCGATG GCGAGATTGT CGAAGTTGAA CCGCACTTCG ATGTAGAAGG AGCGCGGGTT
GTGGTTCGCG CCTTTGATCG TCTTCACCGC CTGGCGCGCG GTCGTTACGC CCGCACCTTT
CTGAATGTGA CCGATAGCGA CGTGATCCAA CAGATTGCCG GTGAAGTGGG GTTGCAGGCG
CAGGTGGATG CGACGAGCCG GGTTCACGAG TATCTTGTGC AGTGGAACCA GACAAACCTG
GAATTTCTGC GCGAACGGGC GGCGGCGCTC GGCTATCTGT TGTATGTCGA TGGACGGAAA
CTCTTCTGTG TCAAGCCCCC TTCCGCCAGA GCACCGGTCG AGTTGAAATG GGGTGAGGAT
CTGAGCGCCT TTCACCCGCG CTTGAGCACG ATCGATCAGG TGAATGAGGT GAATGTGCGC
GGTTGGGACC CACAAAAAAA AGAAGTGGTG ATCGGTCAGG GAACGACTGG CGCGGTGACG
CCTGCGATTG GCGTCCCCGA CAAAGGCGGC GCGCTGGCGA AGAAAGCGTT CAGCATCACG
GCGAAAGATT TGCTGACCGA GTCCGCCGTG CGCTCGCAAT CGGAAGCGGA ACAGATCGCA
AAAGCGGTGC TCAATCAGCA TGAAAGCCGG TGTATCGAAG CGGATGGCAC GGCTGCCGGC
AACCCGAAGA TCAAGGCGGG AGCAGCGGTC AAAATAACCA ACATTGGCAT TCGCTTCAGC
GGCGCCTATG TTGTCACCAG CGCGACGCAT CGCTATAACG CTGCTGGTTA TGTCACCGAC
TTTTCGGTGT CGGGGGTCAA CCCGGATGCT CTGCTGCACC TGCTGCAACC GGAAACGCCA
CGCCTGAGGA TTGAAGGACT GGTTATCGGG ATTGTGACCG ACAACAATGA TCCGGACAAC
CTGGGGCGTG TCAAGGTGAA GTTTCCGACG CTTTCGGATC AACAGAGCCA TTGGGCGCGA
GTGGTCAGTG TCGGCGCAGG CGCCAACCGT GGGATCGAGT TTCTGCCGGA AGTGAACGAT
GAAGTGCTGG TGGGATTCGA GGCTGGCGAT ATGCGCGCCG TGTATGTGAT CGGTGGTTTG
TGGAACGGCA AGGATGCTCC GCCGAAGAAG ACCGGCGAGA TCGTCAAAGG CGGGAAAGTT
GAGCAACGTG TGGTCAAATC GCGCTCCGGT CATGTGATTA CACTGGATGA TAGCGATAGT
GCGCCGTCGA TTACCATCGA AGACAAGAGT GGCAATATGA TCAAACTCGA CAGCAAGAAG
AACGAGTTGA CGATCAAAGT CAAAGGGAAT GGCACGATCA GCGCCGATGG CAACCTGACG
ATCCAGGCAA AGGGCAAGAT TGACATCAAA TCGCAGCAGG CAATGGCTAT CGAAGGCGCC
ACCGGTCTCG ATCTGAAGTC GAATGCAAAT GCCTCCTTGC AGGCGAATGC CAGCCTCGAT
CTGAAATCCA ATGCTACGGC CTCCTTGCAG GCGAATGCGA CGCTCGATGT GAAATCGTCG
GCGATTCTGA CGATCCAGGG AACGCTGGTC AAAATCAACT GA
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| Protein sequence | MSNNNNDRHV SDFYLKLDGA DAPLELVRDI LDITIENSLH LPDVATLVIN DRRLTWVDDS
RLAPGKTLVV NVRRNRATET IFDGEIVEVE PHFDVEGARV VVRAFDRLHR LARGRYARTF
LNVTDSDVIQ QIAGEVGLQA QVDATSRVHE YLVQWNQTNL EFLRERAAAL GYLLYVDGRK
LFCVKPPSAR APVELKWGED LSAFHPRLST IDQVNEVNVR GWDPQKKEVV IGQGTTGAVT
PAIGVPDKGG ALAKKAFSIT AKDLLTESAV RSQSEAEQIA KAVLNQHESR CIEADGTAAG
NPKIKAGAAV KITNIGIRFS GAYVVTSATH RYNAAGYVTD FSVSGVNPDA LLHLLQPETP
RLRIEGLVIG IVTDNNDPDN LGRVKVKFPT LSDQQSHWAR VVSVGAGANR GIEFLPEVND
EVLVGFEAGD MRAVYVIGGL WNGKDAPPKK TGEIVKGGKV EQRVVKSRSG HVITLDDSDS
APSITIEDKS GNMIKLDSKK NELTIKVKGN GTISADGNLT IQAKGKIDIK SQQAMAIEGA
TGLDLKSNAN ASLQANASLD LKSNATASLQ ANATLDVKSS AILTIQGTLV KIN
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