Gene Rcas_2803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2803 
Symbol 
ID5540290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3624935 
End bp3625585 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content55% 
IMG OID640894930 
ProductArsR family transcriptional regulator 
Protein accessionYP_001432892 
Protein GI156742763 
COG category[K] Transcription
[S] Function unknown 
COG ID[COG0640] Predicted transcriptional regulators
[COG3860] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCTC CACAAAATAC TGAAGAATCC AATGTGCAAA GCCGATGCGT CCAGTTTTGT 
CGTGCTCATA CCAAAGCGGA GGAGCGACAG TTGAATTCGG AAGCGCTATC AACGACGGTG
CGCTATCTCA AGGTGATGGC GCACGCCACC CGCCTCCGCA TCCTGGGCAT TCTTGCTGAT
GGAGAGTGGA GTGTTTCTGA ACTGGCCGAG TTGCTTGACA CAACCAGTTC GACCGTATCA
CGCCACCTGG CAAAACTCCA GGAAGTCGAT CTCGTCCGAA TGCGAATGGA TGATGCAAAC
CACGTCTACT CCTTGAATGA CGAAACGCTG CAACGAATCA ACCGCGACCT GATCAGCCCC
GCCAGCATTG TTGCAATTGG CGAGGAAAGC GTCGGCGATG CTTGGGAGCA GCGTGTACTT
ACCACGTTTC TCGATGGTGA CAGACTCACG AAGATCCCCG ATAAGCCCAG GAAGCGCCTG
GTCATTCTCA CATGGCTGGT TCAAAAGTTC TCCCCTGGAG TCAGGTATCC AGAAGCGCAG
GTCAATGCGA TCATCAGGCG CCATCATGAC GATACCGCCA CGCTACGGCG TGAACTGATC
GCTGCCCGAC TCATGCAGCG CGATGGCGGC GTCTACTGGC GTGTGGATTG A
 
Protein sequence
MEPPQNTEES NVQSRCVQFC RAHTKAEERQ LNSEALSTTV RYLKVMAHAT RLRILGILAD 
GEWSVSELAE LLDTTSSTVS RHLAKLQEVD LVRMRMDDAN HVYSLNDETL QRINRDLISP
ASIVAIGEES VGDAWEQRVL TTFLDGDRLT KIPDKPRKRL VILTWLVQKF SPGVRYPEAQ
VNAIIRRHHD DTATLRRELI AARLMQRDGG VYWRVD