| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2800 |
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| Symbol | |
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| ID | 5540287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3620835 |
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| End bp | 3622727 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894927 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001432889 |
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| Protein GI | 156742760 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA ACAAACGACG ACTGACCCGG CGAACATTCC TGCGCGCTGC GGCTATCGGC
ATTGGTTCAG CGACACTTGC CGCCTGTGGC GGCGGCGGCG GCGCCACTGC TCCTACAGCG
CCGCCCGCAA CGGTTCCTCC GCCGACGACC GCTCCAACCC TCGCGCCGGT GCAACCCACG
CCGCCTCCGA CGACAGCCCC CGCGCCCACG ACTGCACCAG CCAGCGCCGT GACCAACTCG
CTCGGCGTCA CCCTGCCGGC AAACGCAGCG CCGCTTGAGC ATCAGGCATT TGTCGTCTAC
TTCGACATCA CTGCCGACTT CACCAGCCCC AATCAGATGG AGACGATCTA CAAGTCGGGA
GGGTTTGGCA GCATCACCAA CCTGACCGGC GATACGCTCG TGCGCCTGAA TAAAGATTTT
CAGGTACAAC CGGCTGCTGC GCTTTCGTGG TCGTCGGATG AAACCGGCAA GGTCTGGACG
TTCAACCTGG ACCCCAACCT GGTCTGGAGC GATGGCACAC CGGTGACAGC CGAAGACTTC
GTGGCGACCT TCCGCTACGC TGCCGATCCG AAGCATGCCT GGGATTTCGC CTGGTACTAC
AGCGCACCCG GCGCAATCAA GAACTGGGAC AAGTGCGTTG CTGGCGAACT GCCGCTGGAA
GAGCTTGGCG TGACCGCCAA AGATGCCCAT ACGCTGGTTA TCGAAACCGA AACGCCAGCC
CCTTTCTTGC CCGCAAAACT GGTCTACAGC GAGGTGTTGA GCGCCGCAAA ACTGAAGGAA
TATGGTTCTG GTCTCTATAC CGCCGATCCG GCAAAGACGA TTTCGTGCGG ACCGTACCTG
CTGAAAGAGT TCAAGCCGGG CGAGCGGGTG GTCTTCGAGA TCAACCCGAC GTACAAAGGC
ACCAACCGCC CGCGCATTGA GCGTGTCATC CAGATCGCTG CGCGACCGGA AGCCATGTTC
GCCGGGTATC AGGCAGGCGA GGTGGACCGC GTGACCGGAG AGCAGTTGCA GACTGCCGAT
AACGAAATCA TTGCCCGCGA CCCCGAACTG TCGAAACAGG TGCGCCTCAC TGCTGCCGAT
TTCCGCACGG ACTACCTCTT CTTCGACTGC CAGAACCCGC CGTTCAACGA CGTGCGGGTG
CGCCAGGCGT TCAGCCACAT CATCGATCGT GACACGCTGA TCAAGACGAT CATCACGCCG
ACGCAAGGCA TCCCGGCATA CTCGTTCCTG ATGCCGGGAT TCCCGGCGTC GAACTCCGAA
GGGCTGAAGG ATATTCAGCG CTACGATCCC GAACGTGGCC GCGCGCTGCT GAAGGAAGCC
GGCTATGAGG GAGGCAAGGG CTTCCCCAAA CTGACCCTCT GGCTGCGCAA CGAACCGCAG
ATTCGCCAGG CGCTCGCAGC GGCGATTGCG GCGGCGATCA CGCAGGAGTA CGGCATCGAA
GTCGAGGTCT CGAACAAAGA GTTCAAGACC TTTATGGACG CGCTCAACGC CAAGCCGACC
CAGATTCAGT TCGGTATGGT GTCGTATGGC ATCGACTTCC TCGATCCGTC GAATATGCTC
GGCGTCTGGC TCAGCACGGG GCGCCACAAC TGGTTCAACA AGAAGTTCGA CGAGATGGTG
CTGAAAGCGG CAGAGATGAC CGATCAGGAA GCGCGCATCA AAATCTTCCA GGATGCCGAA
CGGTTGCTCT GCGAAGAAGC GCCGGCGGTC TTTATCTATC ACCGCACCGT TGCCGATATC
TACAAGCCGT ATGTCGTCGG CGAGTGCTTC GAGCCGAACA TCGCCGGATT CGCCGGATTG
CAGTGGCCCG GCTTTACATC GATGAGCGAC TCACTCCAGA CGCTGTACAT CAGCGATGAA
GTGACAAAAT ATCGCAAGGC GCCGCCGAAG TAG
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| Protein sequence | MTDNKRRLTR RTFLRAAAIG IGSATLAACG GGGGATAPTA PPATVPPPTT APTLAPVQPT
PPPTTAPAPT TAPASAVTNS LGVTLPANAA PLEHQAFVVY FDITADFTSP NQMETIYKSG
GFGSITNLTG DTLVRLNKDF QVQPAAALSW SSDETGKVWT FNLDPNLVWS DGTPVTAEDF
VATFRYAADP KHAWDFAWYY SAPGAIKNWD KCVAGELPLE ELGVTAKDAH TLVIETETPA
PFLPAKLVYS EVLSAAKLKE YGSGLYTADP AKTISCGPYL LKEFKPGERV VFEINPTYKG
TNRPRIERVI QIAARPEAMF AGYQAGEVDR VTGEQLQTAD NEIIARDPEL SKQVRLTAAD
FRTDYLFFDC QNPPFNDVRV RQAFSHIIDR DTLIKTIITP TQGIPAYSFL MPGFPASNSE
GLKDIQRYDP ERGRALLKEA GYEGGKGFPK LTLWLRNEPQ IRQALAAAIA AAITQEYGIE
VEVSNKEFKT FMDALNAKPT QIQFGMVSYG IDFLDPSNML GVWLSTGRHN WFNKKFDEMV
LKAAEMTDQE ARIKIFQDAE RLLCEEAPAV FIYHRTVADI YKPYVVGECF EPNIAGFAGL
QWPGFTSMSD SLQTLYISDE VTKYRKAPPK
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