Gene Rcas_2783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2783 
Symbol 
ID5540269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3599896 
End bp3600504 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content58% 
IMG OID640894909 
Producthypothetical protein 
Protein accessionYP_001432872 
Protein GI156742743 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGGA TTGGATCGAT CAGTCTGATT GTTCTTCTCG CTGCGCTGGC AACCGCGTGC 
AGCAGCGCGC CGCAGACGGT GACCGCTCCA TCGAGCGCTT CGACGCCTTC GAGCATGTCC
GGCATGGATC ATTCGACCAT GATGCCGGGT ATGCATGAAA CACCCTATGA TGCGCTCTTT
ATCGATAGCA TGATCATGCA TCACGAAGGC GCCATCGTTA TGGCGCGGCA GGCGCTCGAA
TCGGCTGAAC GTCCCGAAAT TCGGCAGTTG GCAGAGGCAA TCATCAGCGC ACAGCAGAAC
GAAATAGACC AGATGCGTTC GTGGCGCGCG GCGTGGTATC CTGATCTTGC ACCAACGGCT
GGCATGGGAA TGGAAATGGG TCCGATGATG GTCGCCGATG GACCGGCGCC GTTCGATCGG
CGTTTTATCG AAGCGATGAT TCCACACCAC GAAGGCGCCA TCGCCATGGC ACGCGATGCG
CTTCAGCGTG CGGAGCGCCA GGAAATCAGG GATCTGGCGC AGTCCATCAT TGCGGCGCAG
GACGCAGAAA TCGCCCAAAT GCGAACCTGG CTTAAAGCGT GGTATGGTAT CGAGGATACC
AACAAATAG
 
Protein sequence
MPRIGSISLI VLLAALATAC SSAPQTVTAP SSASTPSSMS GMDHSTMMPG MHETPYDALF 
IDSMIMHHEG AIVMARQALE SAERPEIRQL AEAIISAQQN EIDQMRSWRA AWYPDLAPTA
GMGMEMGPMM VADGPAPFDR RFIEAMIPHH EGAIAMARDA LQRAERQEIR DLAQSIIAAQ
DAEIAQMRTW LKAWYGIEDT NK