Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2783 |
Symbol | |
ID | 5540269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3599896 |
End bp | 3600504 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640894909 |
Product | hypothetical protein |
Protein accession | YP_001432872 |
Protein GI | 156742743 |
COG category | [S] Function unknown |
COG ID | [COG3544] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGGA TTGGATCGAT CAGTCTGATT GTTCTTCTCG CTGCGCTGGC AACCGCGTGC AGCAGCGCGC CGCAGACGGT GACCGCTCCA TCGAGCGCTT CGACGCCTTC GAGCATGTCC GGCATGGATC ATTCGACCAT GATGCCGGGT ATGCATGAAA CACCCTATGA TGCGCTCTTT ATCGATAGCA TGATCATGCA TCACGAAGGC GCCATCGTTA TGGCGCGGCA GGCGCTCGAA TCGGCTGAAC GTCCCGAAAT TCGGCAGTTG GCAGAGGCAA TCATCAGCGC ACAGCAGAAC GAAATAGACC AGATGCGTTC GTGGCGCGCG GCGTGGTATC CTGATCTTGC ACCAACGGCT GGCATGGGAA TGGAAATGGG TCCGATGATG GTCGCCGATG GACCGGCGCC GTTCGATCGG CGTTTTATCG AAGCGATGAT TCCACACCAC GAAGGCGCCA TCGCCATGGC ACGCGATGCG CTTCAGCGTG CGGAGCGCCA GGAAATCAGG GATCTGGCGC AGTCCATCAT TGCGGCGCAG GACGCAGAAA TCGCCCAAAT GCGAACCTGG CTTAAAGCGT GGTATGGTAT CGAGGATACC AACAAATAG
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Protein sequence | MPRIGSISLI VLLAALATAC SSAPQTVTAP SSASTPSSMS GMDHSTMMPG MHETPYDALF IDSMIMHHEG AIVMARQALE SAERPEIRQL AEAIISAQQN EIDQMRSWRA AWYPDLAPTA GMGMEMGPMM VADGPAPFDR RFIEAMIPHH EGAIAMARDA LQRAERQEIR DLAQSIIAAQ DAEIAQMRTW LKAWYGIEDT NK
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