Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2756 |
Symbol | |
ID | 5540242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3568579 |
End bp | 3569391 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640894882 |
Product | hypothetical protein |
Protein accession | YP_001432845 |
Protein GI | 156742716 |
COG category | [R] General function prediction only |
COG ID | [COG4821] Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0332129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCCTG ACTCAGCACC TGCGCTGGAC TACCTGGAAC GCGCCGAACA GATCGTGCGC CGGGTGCGCG AGACGCAGAT GCCTGCCATT GTTGAAGCGG CGCGCATCTG TGCTGATACC ATTGCTGCTG GCGGGCTGGT GCATCTCTTT GGCACCGGTC ACTCGCGCAT CCCCATCGAG GAAATTTTCC CGCGCCACGG GAGTTTTCCC GGCTTTCACC CGATTGTCGA ACTGTCGCTC ACGTATCACA ATCCGGTTGT TGGACCCAAC GGGCAGCGCC AGGCGATGTT CCTTGAGAAG GTCGAGGGGT TTGGTCAGGT CATCCTGCGC AACTTCGTGT TTGGTCCGCA CGATAGTTTC ATCATCTTCT CGAATAGCGG CGTCAACCAG GTGGTTATCG ATGTCGCCCT CGAAGTGAAA GCGCGCGGGA TGCCGGTCAT TGCCGTGGTG TCGGTCGAGC ATTGCCGGGC GTCCACGCCG CGCCACAGCA GCGGCAAACG CCTGATCGAT TACGCCGATG TCACGATCGA CAACTGCGCG CCTGCCGGCG ATGCGCTGGT GACTATCGAA GGCTTGTCGT ATCCGGTCGG TCCCGGTTCG ACAATCGGGT ATGCCGCAGT GGTCAATGCA CTGAAGTGCC TGGTTGCCGC CGAACTGACG AAACGCGGAC AGCCGCCGCT GGTGCTGACC AGCAGTGTGT TGATCGGCAG CGAGGCCTCG GAGGAACTCT TCGAGCGCAC CTATGACGAC TACCGGGCGC GTGTGGCGCA GGTGTACGGA GGAGAACGTT CAACGCCGCC AACATCGCGC TGA
|
Protein sequence | MMPDSAPALD YLERAEQIVR RVRETQMPAI VEAARICADT IAAGGLVHLF GTGHSRIPIE EIFPRHGSFP GFHPIVELSL TYHNPVVGPN GQRQAMFLEK VEGFGQVILR NFVFGPHDSF IIFSNSGVNQ VVIDVALEVK ARGMPVIAVV SVEHCRASTP RHSSGKRLID YADVTIDNCA PAGDALVTIE GLSYPVGPGS TIGYAAVVNA LKCLVAAELT KRGQPPLVLT SSVLIGSEAS EELFERTYDD YRARVAQVYG GERSTPPTSR
|
| |