Gene Rcas_2756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2756 
Symbol 
ID5540242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3568579 
End bp3569391 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content61% 
IMG OID640894882 
Producthypothetical protein 
Protein accessionYP_001432845 
Protein GI156742716 
COG category[R] General function prediction only 
COG ID[COG4821] Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0332129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCTG ACTCAGCACC TGCGCTGGAC TACCTGGAAC GCGCCGAACA GATCGTGCGC 
CGGGTGCGCG AGACGCAGAT GCCTGCCATT GTTGAAGCGG CGCGCATCTG TGCTGATACC
ATTGCTGCTG GCGGGCTGGT GCATCTCTTT GGCACCGGTC ACTCGCGCAT CCCCATCGAG
GAAATTTTCC CGCGCCACGG GAGTTTTCCC GGCTTTCACC CGATTGTCGA ACTGTCGCTC
ACGTATCACA ATCCGGTTGT TGGACCCAAC GGGCAGCGCC AGGCGATGTT CCTTGAGAAG
GTCGAGGGGT TTGGTCAGGT CATCCTGCGC AACTTCGTGT TTGGTCCGCA CGATAGTTTC
ATCATCTTCT CGAATAGCGG CGTCAACCAG GTGGTTATCG ATGTCGCCCT CGAAGTGAAA
GCGCGCGGGA TGCCGGTCAT TGCCGTGGTG TCGGTCGAGC ATTGCCGGGC GTCCACGCCG
CGCCACAGCA GCGGCAAACG CCTGATCGAT TACGCCGATG TCACGATCGA CAACTGCGCG
CCTGCCGGCG ATGCGCTGGT GACTATCGAA GGCTTGTCGT ATCCGGTCGG TCCCGGTTCG
ACAATCGGGT ATGCCGCAGT GGTCAATGCA CTGAAGTGCC TGGTTGCCGC CGAACTGACG
AAACGCGGAC AGCCGCCGCT GGTGCTGACC AGCAGTGTGT TGATCGGCAG CGAGGCCTCG
GAGGAACTCT TCGAGCGCAC CTATGACGAC TACCGGGCGC GTGTGGCGCA GGTGTACGGA
GGAGAACGTT CAACGCCGCC AACATCGCGC TGA
 
Protein sequence
MMPDSAPALD YLERAEQIVR RVRETQMPAI VEAARICADT IAAGGLVHLF GTGHSRIPIE 
EIFPRHGSFP GFHPIVELSL TYHNPVVGPN GQRQAMFLEK VEGFGQVILR NFVFGPHDSF
IIFSNSGVNQ VVIDVALEVK ARGMPVIAVV SVEHCRASTP RHSSGKRLID YADVTIDNCA
PAGDALVTIE GLSYPVGPGS TIGYAAVVNA LKCLVAAELT KRGQPPLVLT SSVLIGSEAS
EELFERTYDD YRARVAQVYG GERSTPPTSR