| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2749 |
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| Symbol | |
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| ID | 5540235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3557780 |
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| End bp | 3559963 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894875 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001432838 |
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| Protein GI | 156742709 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5305] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAGC CGCGTCCCTG GAGTCTTTGC GCCCTGGCAG TGAGCAATAC AACCGCACAC
ATGCATGACG CTCCACATCC GCGATTTCGT GCCCTCAGTC TCGCACTGCT CTTCGTGGTG
GCGATAGCGT TGCGTTGCTA CCGCATCGAT GCGCAGAGTT TCTGGTATGA TGAGGGTTTA
ACGGTCGCGC TTGCAGTTCG ATCACTCGAC GACATCGCGC GCGCCGCCGC CGCCGATGTG
CACCCGCCAC TCTACTACTG GCTCCTCCAT GGTTGGCTGT TGCTGATGGG AACGAGCGAG
GCGGCGGCGC GCGCGTTCAG CGCCGTCTGT GGCGCCGTTA CCGTTGTGAT GACGGCGATC
CTCGGTCGGC GCTGGTCTGG CGCCGTTGCC GGATGGCTTG CCGGCATCGC TGCAGCCGTT
TCGCCGTGTG CCATTCATTA TAGCCAGGAA ACCCGCATGT ACGCCCTGGC AATGCTGCTG
GCGGCATGTC TCTGGCTCAC GCTCGATGCC GTGGTTCGGG AAAGAACCGG CGATCATGCC
ATCGATCCGT CCGGCATTGC GCACCATCCC CGGCGCTGGC GGATTCTCTA CGGCGCGGCG
GCGCTTGCGG CGCTCGCAAC GCACTATTTC ATGGTCGCAT TCGTGGCAGC TGCCTCGCTC
ATTGGCGCGC TCTTCCTGCG CCGCCGCGCG CGATTGGTCT GGATCACAGG GCATCTGGCG
CTCGCTGTAT TCTTTCTGGC GCTGGTCTGG AACAGTCGTG AGCGCCTGGC GGGCTGGACG
TTCGCTAAAC AATCGACCGA CCCGCTCTTT ATTCTCACCG ATGTGCTGCA CGGGTTCAGC
CTTGGTCCAT CGGCCTCTTC CCCGTCCTGG TTCTGGCTCA TCGGCTTTGG GGCGCTGCTC
GTGGCAGTCT TCCCGGCGTG GCGCGCATCG CCAATGATGA CCAGTATGGC GCTGGTCTGG
CTGGTTGCGC CGCTGGGAGC GATCATCATT CTTTCGCTCA ATCAGCCTTA CTACAAACTG
CGCTTTCTCC TGCCCGCCCT CCCCGCATAC CACTTGCTCC TCGGTATTGG CGGCGCGGCC
CTGGCGCGTA TCATTGCCAC AAGGTTCGGT GCGCGCATTG GCGCCGGCAT GGTCGTTCTC
ACGACAGTGT GGTTCATGGC CGCCGCCATT GCGCCGTTGC GCAACGAGTG GTTCGATCCC
GCCTTTCAGC GCGACGATTA CCGTGGGCTG GCGCGGGCTG TCGCTGCCAC TGCCCGCGCC
GACGACGCCA TCCTGCTGAT CGGTCCAGGG CAGATCGATG TGTTCGACTA TTACTTCAAG
GGTTTGCAGG TGCGCTACCC GCTGCCGCGT TTCCGTCCGC TCGACCCGGC AGCAACCATT
GCTGAACTTG AACAGATAGC ACAGCGCCAC AGGCGAGTCT ATGGGGTCTT CTACGTTCCC
TACGAAGCCG ATCCCGACGG CGTGGTGAGC GCCTGGCTTG CTGAACGCGC CTTCCGCGCC
GAAAGCCGCT GGTACGGTGG CGTCGAGTTA GTGGTCTACG AACTCGGCGA CGTCGGTGCC
CCGCTGCGTG ATGTGAGCGT GCGGTTCGGC GATGCGCTGA TCCTGGAGCG CGCCGCCGTC
TCGGCGATGC GCGTCGCAGG CGGCGACGCG GTGCGGGTTG AACTGCACTG GCGCGTCAGT
GCGCTACCAG AACGCGACCT GTACCTGTTC GCGCATTTGC TTGACATAAA TAATCGTATC
CGCGCACAGC ACGATGGACC GCTGGCGCGC GTTCCAACCA GCGCCTGGCA AGTCGGCGAA
ATCTACCGCA GCCGCGCGGC AGTCCTTGTG CCGCCAAACA CGCCGCTGGC GACGTACCGC
CTCGTTATCG GCGTGTACGA TCCGCGCACC GGCAAACGGT TGCTGCTGGA GGACGGGCGG
GATGGGTGGG AGGCGGAGTA CGTTTTGTCC AGATACGAAG GCGAAGCGCA TTGCTGGACG
ACGACTGTCG ACGTCCGAAG GGGAGAGGAA GCATGTCGTT CGATGGATGG AATTCATCTG
TGCAAGGCGC AACGAACGCA CTTCACCTAC CCCACGCGCT CCTCCGCCAG CGCTGCCTTC
ACTGCCGGGC GCGGCACACG CATGCGCATC CACCCCAGAC TGACGATGCC AACCGCCATC
AGCACAACGA AGAGCGCCTC GTAA
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| Protein sequence | MDQPRPWSLC ALAVSNTTAH MHDAPHPRFR ALSLALLFVV AIALRCYRID AQSFWYDEGL
TVALAVRSLD DIARAAAADV HPPLYYWLLH GWLLLMGTSE AAARAFSAVC GAVTVVMTAI
LGRRWSGAVA GWLAGIAAAV SPCAIHYSQE TRMYALAMLL AACLWLTLDA VVRERTGDHA
IDPSGIAHHP RRWRILYGAA ALAALATHYF MVAFVAAASL IGALFLRRRA RLVWITGHLA
LAVFFLALVW NSRERLAGWT FAKQSTDPLF ILTDVLHGFS LGPSASSPSW FWLIGFGALL
VAVFPAWRAS PMMTSMALVW LVAPLGAIII LSLNQPYYKL RFLLPALPAY HLLLGIGGAA
LARIIATRFG ARIGAGMVVL TTVWFMAAAI APLRNEWFDP AFQRDDYRGL ARAVAATARA
DDAILLIGPG QIDVFDYYFK GLQVRYPLPR FRPLDPAATI AELEQIAQRH RRVYGVFYVP
YEADPDGVVS AWLAERAFRA ESRWYGGVEL VVYELGDVGA PLRDVSVRFG DALILERAAV
SAMRVAGGDA VRVELHWRVS ALPERDLYLF AHLLDINNRI RAQHDGPLAR VPTSAWQVGE
IYRSRAAVLV PPNTPLATYR LVIGVYDPRT GKRLLLEDGR DGWEAEYVLS RYEGEAHCWT
TTVDVRRGEE ACRSMDGIHL CKAQRTHFTY PTRSSASAAF TAGRGTRMRI HPRLTMPTAI
STTKSAS
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