| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2748 |
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| Symbol | |
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| ID | 5540234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3556602 |
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| End bp | 3557897 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894874 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001432837 |
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| Protein GI | 156742708 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC CGACTGCTAC GATGACCGCT CAGGCAGAAG CGGTTGTCCG GCGCCATGCT
GCGCGCAATT TCTGGCTCAA CGTCCTCGAC GGCGGAACAT TCTACCTGGG CTTGAGCATG
GTATCGCGCT TCACCGTGCT CCCGCTGTTC GTCGAGCGCC TTTCACCGGA TCGCTGGTTG
CAAGGGCTGA TTCCGACCAT CAACTACACC GGATGGTTCT TGCCCGGACT GTTTATTGTG
CCGCTGATCG CCGCGATGCC GCGCCGCAAA CCGATTCTAC TGACGGCAAC ACTCTTCGAG
CGTTTGCCAT TCCTGCTTTT GGGGCTTGCA CTCATTCTCT GGCCCGACCT ACCGGGCGCC
GGTCTGCTGG CGATCTTCTT CTGTTGCTAC GCTATCCATG CCATCGCTGC CGGATTTGCT
TCTATCCCCT GGCAAGATTT CATTGCGCGC GTCATTCCAG GCACACGGTG GGGCATCTTT
TTCGGTTTGC AGAGCGGACT TGGCGGCTTG CTCGGCATCG GCGGCGCGGC AGTTGCTGCC
TGGGTGCTGA CGGCATTTCC CTTTCCGCAG AGCGTCGGCA TTCTATCACT CATCTGCTTT
GGGTCGATGG TCGTGTCATT CATCTTCCTG GCGGCGACGG TCGAGCCGGC GCTGCCACCG
CAGCCAGCGC AACCGCTGAC CGCGTTCCTG CGCGGCGTGC GACCACTGCT GGAGCGCGAC
GCACCGTTTC GCAACTATCT GATCGGGAGG GTCGGCATTG CGCTGGCGCT CATCGGTCAT
AACTTCATCA CAGCCCTTAG TCTCGAACGC TTCAACCTGT CTGGCGCTGA TGTCGGCGGT
TTTACAGCGG CGCTGCTGGC GGCGCAGGCG GTGAGCGACC CGATCCTCGG CGGGATGGCG
GATCGCTGGG GACACAAGCA GGTGCTGGAA CTTTCGACGG CGGTAGGATT GGCGGCGATT
CTGCTGGCGC TGATTGCACC ATCGCCCGCG TGGTTCTTTG TCATTTTTGT GCTGGTCGGC
TTTTCACAGG CGGGGTATAT TCTCTCCGGC TTTACGCTGG TGTTCAGTTT TGCGCCGCCG
GCGCAGCGCC CTGCCTATAT TGGCGTGTCG AACATCGTGA TGGCGCCGAT CGCCGCCGCA
GGACCGCTCC TCTCCGGTTG GCTCGCCGAA CTCGCAAGTT ACGAGGCGCT CTTCGTTGTG
CTGATGGCGG TTGGCATCGT CAGTCTGGGG TGGATGCGCA TGCGTGTGCC GCGCCCGGCA
GTGAAGGCAG CGCTGGCGGA GGAGCGCGTG GGGTAG
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| Protein sequence | MTDPTATMTA QAEAVVRRHA ARNFWLNVLD GGTFYLGLSM VSRFTVLPLF VERLSPDRWL
QGLIPTINYT GWFLPGLFIV PLIAAMPRRK PILLTATLFE RLPFLLLGLA LILWPDLPGA
GLLAIFFCCY AIHAIAAGFA SIPWQDFIAR VIPGTRWGIF FGLQSGLGGL LGIGGAAVAA
WVLTAFPFPQ SVGILSLICF GSMVVSFIFL AATVEPALPP QPAQPLTAFL RGVRPLLERD
APFRNYLIGR VGIALALIGH NFITALSLER FNLSGADVGG FTAALLAAQA VSDPILGGMA
DRWGHKQVLE LSTAVGLAAI LLALIAPSPA WFFVIFVLVG FSQAGYILSG FTLVFSFAPP
AQRPAYIGVS NIVMAPIAAA GPLLSGWLAE LASYEALFVV LMAVGIVSLG WMRMRVPRPA
VKAALAEERV G
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