Gene Rcas_2731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2731 
Symbol 
ID5540217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3533703 
End bp3535214 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content61% 
IMG OID640894857 
Producthypothetical protein 
Protein accessionYP_001432820 
Protein GI156742691 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACA TCCGACAGCG TGCTCTCCTG ATCATCGTGA CCGCCATCAC TGCGCTGGTG 
ACGGTTGCCG TCGCCTACCA GGCGTTGCCT GGTCGCGCAT TCGCCGCCGA TGATTTTCAG
TGGCTGCTGA ATGTGCGTGA TCGGTCGTTC CTGGCGATTG CTGCGCGTGC GTTCGACGTG
AGCGCCGAAT CACACTTCTA CCGCCCGCTT GTCTGGTTGC TGTTGTGGAG CGAATGGCGC
CTCTTTGGCT TTGATCCGGG CGCGTTTCAC CGGGTGTCGC TGACGCTGCA CGTGATCAAT
GCGGCACTCA TCGGTTGGTT GACCTTTCGG ATGGTTCGAG CACAGTCATC TATCGCGCCG
GTCATCGGAT ATGCAGTGTC GGCACTGGCA ACAGCGCTGC ACCCGGCGCC GTTCGAGGCA
GTGGTGTGGG TGTCGGCGCA GAGTGAACTG CTGGCTGCAT TCTTTCTCGT ATTGACGCTG
CATTGTTGGT GGAGCGCCGG TAGGATCGAT ACAGCGTCGC TGCGTCGCTG GTTCTGGTAC
AGTGCGGCTG CCGCAATGCA GACGTGTGCG TTGATGACCA AAGAGAGCGC TATCATTGGG
TTGCCGTTGA TCGTCCTGAT CGAATGGGAA TCGGCGCGCC AGATGCGGCG CCGTATGGCG
CTCCTGCCTC TCGTTCTGCC CCTTCTGGCG ACTATCGTCT ATCTTTTCGC TGCGCTCGAT
GTCGCATCGC GCAACTATGT GGTGCGCGAA AGCGGCTACA GCTTTGGCGC GCAACTGTTG
CTTAACCCGC TGCGGAGCCT TGGCTTGATC GTTGCGCCGC TGCCGGGTGT CGAGTATGGC
AGAGAGGCTT GGTTGCCGCT TGCGGGCGCG TGCGTGGTGC TTGCCGGCCT CATTGCTTTG
CCGATTGCCT GGCGATACGG AAGCGCCGCT TCTCTGCTGA CTGGCATGCT GGCGCTGATC
GTCACCCTTG CGCCAACGGC GCCTTTCGCT TCGTCGCCCG ACTCGCGCTA TCTCTATCTG
CCGGTGATGG TGCTTGCCCT GATGACCGGC AGGTGGTCGT CTGCTCTCAC CGACCGGGTG
ATGCCGGCGG ATCTGAGCGG CATACGGAGC AACGATAGAC GACATGCTGC GGACATGCGC
ACTCTTTCTT GGGTAGGGCG CCTGTGGGTT GGTATGGCTG TGATCCTGGT CGCTCTGGCA
CTTGGCGCAC TGGCAGTGAA CGAGATCCGT GGACGGGAAG TTCGCTTTGC AGCCGGTGCG
CGTCCTGGCG AAGAATTGCG CCTGTTTGCG GCAGCGCAGT GTGCAACCGG GCGCCTGGAT
CGGATGCTGA TCGTGGAGCC GCCAATCGCA GCCCCCCACG TTGAAGCGAT CATTCGCCTG
AGTTGTGGTT CCAACCCATA CACGATGGTC ATCGGTTCAG GCGACATCGA GCATGAAGTG
CGCCCGAATA CGCTGGTCGT CGTCTTTGAT GGCGGGTTTC CACGTCCGCT CATGCGCACA
TCAACACCAT GA
 
Protein sequence
MPNIRQRALL IIVTAITALV TVAVAYQALP GRAFAADDFQ WLLNVRDRSF LAIAARAFDV 
SAESHFYRPL VWLLLWSEWR LFGFDPGAFH RVSLTLHVIN AALIGWLTFR MVRAQSSIAP
VIGYAVSALA TALHPAPFEA VVWVSAQSEL LAAFFLVLTL HCWWSAGRID TASLRRWFWY
SAAAAMQTCA LMTKESAIIG LPLIVLIEWE SARQMRRRMA LLPLVLPLLA TIVYLFAALD
VASRNYVVRE SGYSFGAQLL LNPLRSLGLI VAPLPGVEYG REAWLPLAGA CVVLAGLIAL
PIAWRYGSAA SLLTGMLALI VTLAPTAPFA SSPDSRYLYL PVMVLALMTG RWSSALTDRV
MPADLSGIRS NDRRHAADMR TLSWVGRLWV GMAVILVALA LGALAVNEIR GREVRFAAGA
RPGEELRLFA AAQCATGRLD RMLIVEPPIA APHVEAIIRL SCGSNPYTMV IGSGDIEHEV
RPNTLVVVFD GGFPRPLMRT STP