Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2731 |
Symbol | |
ID | 5540217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3533703 |
End bp | 3535214 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640894857 |
Product | hypothetical protein |
Protein accession | YP_001432820 |
Protein GI | 156742691 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAACA TCCGACAGCG TGCTCTCCTG ATCATCGTGA CCGCCATCAC TGCGCTGGTG ACGGTTGCCG TCGCCTACCA GGCGTTGCCT GGTCGCGCAT TCGCCGCCGA TGATTTTCAG TGGCTGCTGA ATGTGCGTGA TCGGTCGTTC CTGGCGATTG CTGCGCGTGC GTTCGACGTG AGCGCCGAAT CACACTTCTA CCGCCCGCTT GTCTGGTTGC TGTTGTGGAG CGAATGGCGC CTCTTTGGCT TTGATCCGGG CGCGTTTCAC CGGGTGTCGC TGACGCTGCA CGTGATCAAT GCGGCACTCA TCGGTTGGTT GACCTTTCGG ATGGTTCGAG CACAGTCATC TATCGCGCCG GTCATCGGAT ATGCAGTGTC GGCACTGGCA ACAGCGCTGC ACCCGGCGCC GTTCGAGGCA GTGGTGTGGG TGTCGGCGCA GAGTGAACTG CTGGCTGCAT TCTTTCTCGT ATTGACGCTG CATTGTTGGT GGAGCGCCGG TAGGATCGAT ACAGCGTCGC TGCGTCGCTG GTTCTGGTAC AGTGCGGCTG CCGCAATGCA GACGTGTGCG TTGATGACCA AAGAGAGCGC TATCATTGGG TTGCCGTTGA TCGTCCTGAT CGAATGGGAA TCGGCGCGCC AGATGCGGCG CCGTATGGCG CTCCTGCCTC TCGTTCTGCC CCTTCTGGCG ACTATCGTCT ATCTTTTCGC TGCGCTCGAT GTCGCATCGC GCAACTATGT GGTGCGCGAA AGCGGCTACA GCTTTGGCGC GCAACTGTTG CTTAACCCGC TGCGGAGCCT TGGCTTGATC GTTGCGCCGC TGCCGGGTGT CGAGTATGGC AGAGAGGCTT GGTTGCCGCT TGCGGGCGCG TGCGTGGTGC TTGCCGGCCT CATTGCTTTG CCGATTGCCT GGCGATACGG AAGCGCCGCT TCTCTGCTGA CTGGCATGCT GGCGCTGATC GTCACCCTTG CGCCAACGGC GCCTTTCGCT TCGTCGCCCG ACTCGCGCTA TCTCTATCTG CCGGTGATGG TGCTTGCCCT GATGACCGGC AGGTGGTCGT CTGCTCTCAC CGACCGGGTG ATGCCGGCGG ATCTGAGCGG CATACGGAGC AACGATAGAC GACATGCTGC GGACATGCGC ACTCTTTCTT GGGTAGGGCG CCTGTGGGTT GGTATGGCTG TGATCCTGGT CGCTCTGGCA CTTGGCGCAC TGGCAGTGAA CGAGATCCGT GGACGGGAAG TTCGCTTTGC AGCCGGTGCG CGTCCTGGCG AAGAATTGCG CCTGTTTGCG GCAGCGCAGT GTGCAACCGG GCGCCTGGAT CGGATGCTGA TCGTGGAGCC GCCAATCGCA GCCCCCCACG TTGAAGCGAT CATTCGCCTG AGTTGTGGTT CCAACCCATA CACGATGGTC ATCGGTTCAG GCGACATCGA GCATGAAGTG CGCCCGAATA CGCTGGTCGT CGTCTTTGAT GGCGGGTTTC CACGTCCGCT CATGCGCACA TCAACACCAT GA
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Protein sequence | MPNIRQRALL IIVTAITALV TVAVAYQALP GRAFAADDFQ WLLNVRDRSF LAIAARAFDV SAESHFYRPL VWLLLWSEWR LFGFDPGAFH RVSLTLHVIN AALIGWLTFR MVRAQSSIAP VIGYAVSALA TALHPAPFEA VVWVSAQSEL LAAFFLVLTL HCWWSAGRID TASLRRWFWY SAAAAMQTCA LMTKESAIIG LPLIVLIEWE SARQMRRRMA LLPLVLPLLA TIVYLFAALD VASRNYVVRE SGYSFGAQLL LNPLRSLGLI VAPLPGVEYG REAWLPLAGA CVVLAGLIAL PIAWRYGSAA SLLTGMLALI VTLAPTAPFA SSPDSRYLYL PVMVLALMTG RWSSALTDRV MPADLSGIRS NDRRHAADMR TLSWVGRLWV GMAVILVALA LGALAVNEIR GREVRFAAGA RPGEELRLFA AAQCATGRLD RMLIVEPPIA APHVEAIIRL SCGSNPYTMV IGSGDIEHEV RPNTLVVVFD GGFPRPLMRT STP
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