| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2726 |
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| Symbol | |
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| ID | 5540212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3523177 |
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| End bp | 3525240 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894852 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001432815 |
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| Protein GI | 156742686 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTAA TCAGACGTTT CAACCAGCCA GATCGTGCAG GCATCGCCCA TATCATGGCA
GTCATCGGGA TCATGGCGCT TGCGCTGATG CTACGGCTAC TGGTATGGCG CTGGCACGAG
ATGTATCCTC TGGGAGGCGA CGAGCAGGAA TACCTGAATC AGGCGTTGAC GCTGCTACGG
ACGCGGCAAT ATGTCGAACT GCGCCTGATG CGTCCGCCAC TCTACGCCAT TTTTCTGGCG
GCGTGCATCG TTGCCTTCGA TTTGCTCATC CAGAACCTGC GTCTGGTGCA GGCGATCATC
AGCGCCGCCA CGATTGCGCC GCTCTATCTG CTGACAATGC GCCTGTTCGA CAACCGGCGC
ATCGCCATTG TCGCCGGGTT GCTGGCGGCG CTGAACTATA CGCTGGCGTT CACAGCCACT
GAACTGCTGA CCGAAACCCT TTTTCTCTTT GCGGTGACAA CCATCTTCGC ACTCCTGTCG
TGCAGCACGT CCGCTTCTCG ATGGCGAGCG CTCATCGCCA GCATATGCCT GGGAGCGCTG
GCGCTCCTGC GTTCGGTTGC GCTGCCGCTG CTGGCATTGG GTGCGATCTG GCTGGGATTG
CAGGCTGGAA AGCGTGCTGC GACAACCTTC GCGCTGACCG CCATCCTGGT CATTGCTCCC
TGGACGCTGC GCAATTATCT GACCTACGAT GCGCTCATCA TTATCGACAC GACCGGTGCA
GAAAATTTGT GGCTCGATAA TGATCCCGCC GGTCGTGAAG TGGTCAAGCG CCAGTTGTAT
GCCCTTGGCA ACGACATGGC GGCGAGACAG CGCCTGGCAA CTGAACGTGG GATTGCCGCC
ATTCGCGCCA ATCCCGACTA CGTCGCCGCG AAAGTCTGGA GCGAAGCGCG TCGCTTTACC
GCGCTCCAGT TCTTCGACGA TATGCGCAAC CGTCCGGCAA TCTGGGTCCC GCCGTTGCAG
GTCTGGCTGC GCCTGATCCT CGGCGATGGT CTCTGGCTTG TCATCCTGCT CGGCGGCGCC
ATGGGTCTCT GGCTGGCGCC TGCGCGTCGC TGGACGCTTA TCATAGCTGC ACCGTGGACG
CTCTATGTTG TGCTGACAAC CCTGATCTTC CATGTCGAAC CGCGGTATCG GCTGCCCATC
TATCCGGCGC TCATTCCCTA TGCCGCCTGG CTGATTGTGC GTCTGAGCAT GTGGCGGATG
CCGACGAAGC GCCGCATGCC GGCAATGATG GCGGCTGGAG CGACATGCAT CGCTCTCATC
GCCATGACAC TGGCACACCG CCCTTATGTG GCGGAAGCCT GGATGCTGGC ACAGAAACAT
ATCTATCTCT GGCAGGCAGA TCGCGCGCTT GATCGGGGCG ATCTGGATAC TGCACGCGCC
GCAGCCGGGG CAGCACTTCA ACTCGATGAC CGTTCCGCCC TGGCGCGCGT CATTCTGGCG
CGCATCGACC TGGCAACGGG TCGTCCCGAG GCGGCGCTTG CACTCCTGAA TGCAGCCCTG
ACAGCCATCC CTGATCATCC CTATGCCCAC CTGCTCCGCG GCGCTGTGTA TCGCCTGGAA
GGGAATGATC GCGCAGCGCG GCGAGACCTG CGCTACGAAA CGGCATCGCT CGAAGACTTG
CAACGCTGGG CATGGGATAT CTTTCGCCCT TTTGCGCCGC CGCCGAACGC GCTGAACATC
GGCGACCTCG ATCTGGGGTA TGTTCGTGGG TTCCATTTCG CCGAAAATGG CGGTTTCCGC
TGGACGACCG ACCACGCCGA CATCCTGCTG GCGGCACAGT CCGATGGTCT GCTCGAATTG
CGGCTCAGCG GAGACCGATT GCCCGGAGCT CCGCCTGCGG AGGTCGTTTT CCACATCGAT
GGCATCGAGT CCGGTCGAAT GACGGTGTCG CGGGGCTGGC ATACGGCGCG ATTTCCGTTG
CCGCCCGGCG CTGCCGATGA CGGTCAGATA CTGGTGAGCA TCCAGAGCAC GATCTATCGT
CCACGCAGCA TCGACCGGAC GAGTCCAGAC AATCGCCCGC TTGGGGTCGC CATTGATGAG
GCGCGGATCG TGGATGCGCC ATAA
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| Protein sequence | MSLIRRFNQP DRAGIAHIMA VIGIMALALM LRLLVWRWHE MYPLGGDEQE YLNQALTLLR
TRQYVELRLM RPPLYAIFLA ACIVAFDLLI QNLRLVQAII SAATIAPLYL LTMRLFDNRR
IAIVAGLLAA LNYTLAFTAT ELLTETLFLF AVTTIFALLS CSTSASRWRA LIASICLGAL
ALLRSVALPL LALGAIWLGL QAGKRAATTF ALTAILVIAP WTLRNYLTYD ALIIIDTTGA
ENLWLDNDPA GREVVKRQLY ALGNDMAARQ RLATERGIAA IRANPDYVAA KVWSEARRFT
ALQFFDDMRN RPAIWVPPLQ VWLRLILGDG LWLVILLGGA MGLWLAPARR WTLIIAAPWT
LYVVLTTLIF HVEPRYRLPI YPALIPYAAW LIVRLSMWRM PTKRRMPAMM AAGATCIALI
AMTLAHRPYV AEAWMLAQKH IYLWQADRAL DRGDLDTARA AAGAALQLDD RSALARVILA
RIDLATGRPE AALALLNAAL TAIPDHPYAH LLRGAVYRLE GNDRAARRDL RYETASLEDL
QRWAWDIFRP FAPPPNALNI GDLDLGYVRG FHFAENGGFR WTTDHADILL AAQSDGLLEL
RLSGDRLPGA PPAEVVFHID GIESGRMTVS RGWHTARFPL PPGAADDGQI LVSIQSTIYR
PRSIDRTSPD NRPLGVAIDE ARIVDAP
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