| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2625 |
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| Symbol | |
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| ID | 5540107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3386451 |
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| End bp | 3386855 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894749 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_001432716 |
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| Protein GI | 156742587 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.318955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.907816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAGCACA TACACATCCT CACCGACGCC GCTCCGGTTC CACACGGCGC ATACGATCAG
GCTATCCGTG TCGGCAATAT GGTCATCACA TCGAGCTATA TGGGGCTGCA TCCGAGTCAC
GCGGGCATTA TCACCGGCGG CTTCGAAGCG GAATTTCGCC AGGCGATGCA CAACATCGCC
GCCGTGCTTG CGGCAGCCGG ATGTACGCTG CGCGATGTGG TGCGTGTGAA TGTGTCGCTC
ACCGATTTGC AGAAATATAC CGAGATGGAT CGGCTCTACC GCGAATATTT TCACCCGCCC
TACCCGACGC GCCGCACGAT TGGGGTCAAG GAACTACTCG GCGGCGCGCA GGTTGAGATC
GATGTGTGGG CGATTGTGCA AGAGGACCGC GGTCACTCCC AGTAG
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| Protein sequence | MEHIHILTDA APVPHGAYDQ AIRVGNMVIT SSYMGLHPSH AGIITGGFEA EFRQAMHNIA
AVLAAAGCTL RDVVRVNVSL TDLQKYTEMD RLYREYFHPP YPTRRTIGVK ELLGGAQVEI
DVWAIVQEDR GHSQ
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