Gene Rcas_2622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2622 
Symbol 
ID5540104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3384060 
End bp3385211 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content65% 
IMG OID640894746 
Producthypothetical protein 
Protein accessionYP_001432713 
Protein GI156742584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTTC GTCTGTTGGT TCTGATGGTC AGCGCGGCGC TGTTGGCGAG CGCGGCGTTT 
CCGGGGTCGA GCGGTCGTCC GGTGCAGGCG CAGACTATCA TCACCGTCAC CCCCACGCCT
CCGCGTCAGC CTGCCGCGCC AGGCGGCACG CCACGTCCGA CCACCACGCC GGGCGCAACG
GCGAATGACA CCGTCCGCCT GCTCGAAGCA GCGCTGGAAC GCACATCACA GGCGTCGTCC
TATCAGATGC ATGTATCTAT TCGTGCAGCC GGCGTCGTGG CCGGCGCTCG CAGCGCGCGC
GAGGAGACGT TGATCGACTA CAATGGCGAG TATCATGGCG CGAACTTTGC CTTCGTCATG
CGCTCGCCAG AACTCCTGCG CCAGGGTATC GACCCGACTG CCGGCATCAC TGCGGTGTAC
GCAAATGGGG TTACCTATGC GGTCGGTCCG CTCCCCATCC ATGGCGTGAC CGAGCCAGTC
TGGTACACGA TTGGCTCAAA TGCGCCATCA TTTCTGGCGC CCCCCTACCG TCTCGAAGAC
CTGTTACGGC GATTGGGTAA TGCGCTGCCG TTGGCGGAAA TGACCCGCGG TCGCACCGAA
ACCATCGATG GGCGGCGCTG CACCGCGTAT CAGGCGGGTC CCGACGTCGC GTCGGCGGCG
CTGGGAGCGC TGGGACGTCC ACTTGTGCCG CCACGGGCGA CGAATACGAG TGCGTCGCTC
GATCTCGACA TCCGACGGGG AGTTGTGCAA CTCTGGCTCT GTAGCGATGG AGTGCTGCGA
CGGGTTCACG TGATTGCCTC TGGCAATGTT CGCCAGCAGC CATCGAATCT GTTTTCCATC
ACCTTCCGCA TCGATCTCGG CAACATCAAC GGCAGGGTGA CCATTACCGC ACCAGCGCAG
GCGCGCGCCT TGCAGCGCAC CCCTGAGCCG ACCGTGGCTG CGGTGCGCGC CGGTCCTATT
CGAAGTGCGC CAGGGGCAGG CAGCATCGTG GGGCAGATGA ATGTGCAGGA TGCCGTCATC
ATCATCGAGC GCAGCGCCAA CCAGCGCTGG TACCGTGTGC GCGCGCCGGC AGCGACGGGA
TGGGTCAGCG CATCGTTGCT CGCAGTACCT CCCGCTCTTG CGCGCCAGGT ACCGGTCACC
CCTAACCCCT AA
 
Protein sequence
MHLRLLVLMV SAALLASAAF PGSSGRPVQA QTIITVTPTP PRQPAAPGGT PRPTTTPGAT 
ANDTVRLLEA ALERTSQASS YQMHVSIRAA GVVAGARSAR EETLIDYNGE YHGANFAFVM
RSPELLRQGI DPTAGITAVY ANGVTYAVGP LPIHGVTEPV WYTIGSNAPS FLAPPYRLED
LLRRLGNALP LAEMTRGRTE TIDGRRCTAY QAGPDVASAA LGALGRPLVP PRATNTSASL
DLDIRRGVVQ LWLCSDGVLR RVHVIASGNV RQQPSNLFSI TFRIDLGNIN GRVTITAPAQ
ARALQRTPEP TVAAVRAGPI RSAPGAGSIV GQMNVQDAVI IIERSANQRW YRVRAPAATG
WVSASLLAVP PALARQVPVT PNP