Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2622 |
Symbol | |
ID | 5540104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3384060 |
End bp | 3385211 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640894746 |
Product | hypothetical protein |
Protein accession | YP_001432713 |
Protein GI | 156742584 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCTTC GTCTGTTGGT TCTGATGGTC AGCGCGGCGC TGTTGGCGAG CGCGGCGTTT CCGGGGTCGA GCGGTCGTCC GGTGCAGGCG CAGACTATCA TCACCGTCAC CCCCACGCCT CCGCGTCAGC CTGCCGCGCC AGGCGGCACG CCACGTCCGA CCACCACGCC GGGCGCAACG GCGAATGACA CCGTCCGCCT GCTCGAAGCA GCGCTGGAAC GCACATCACA GGCGTCGTCC TATCAGATGC ATGTATCTAT TCGTGCAGCC GGCGTCGTGG CCGGCGCTCG CAGCGCGCGC GAGGAGACGT TGATCGACTA CAATGGCGAG TATCATGGCG CGAACTTTGC CTTCGTCATG CGCTCGCCAG AACTCCTGCG CCAGGGTATC GACCCGACTG CCGGCATCAC TGCGGTGTAC GCAAATGGGG TTACCTATGC GGTCGGTCCG CTCCCCATCC ATGGCGTGAC CGAGCCAGTC TGGTACACGA TTGGCTCAAA TGCGCCATCA TTTCTGGCGC CCCCCTACCG TCTCGAAGAC CTGTTACGGC GATTGGGTAA TGCGCTGCCG TTGGCGGAAA TGACCCGCGG TCGCACCGAA ACCATCGATG GGCGGCGCTG CACCGCGTAT CAGGCGGGTC CCGACGTCGC GTCGGCGGCG CTGGGAGCGC TGGGACGTCC ACTTGTGCCG CCACGGGCGA CGAATACGAG TGCGTCGCTC GATCTCGACA TCCGACGGGG AGTTGTGCAA CTCTGGCTCT GTAGCGATGG AGTGCTGCGA CGGGTTCACG TGATTGCCTC TGGCAATGTT CGCCAGCAGC CATCGAATCT GTTTTCCATC ACCTTCCGCA TCGATCTCGG CAACATCAAC GGCAGGGTGA CCATTACCGC ACCAGCGCAG GCGCGCGCCT TGCAGCGCAC CCCTGAGCCG ACCGTGGCTG CGGTGCGCGC CGGTCCTATT CGAAGTGCGC CAGGGGCAGG CAGCATCGTG GGGCAGATGA ATGTGCAGGA TGCCGTCATC ATCATCGAGC GCAGCGCCAA CCAGCGCTGG TACCGTGTGC GCGCGCCGGC AGCGACGGGA TGGGTCAGCG CATCGTTGCT CGCAGTACCT CCCGCTCTTG CGCGCCAGGT ACCGGTCACC CCTAACCCCT AA
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Protein sequence | MHLRLLVLMV SAALLASAAF PGSSGRPVQA QTIITVTPTP PRQPAAPGGT PRPTTTPGAT ANDTVRLLEA ALERTSQASS YQMHVSIRAA GVVAGARSAR EETLIDYNGE YHGANFAFVM RSPELLRQGI DPTAGITAVY ANGVTYAVGP LPIHGVTEPV WYTIGSNAPS FLAPPYRLED LLRRLGNALP LAEMTRGRTE TIDGRRCTAY QAGPDVASAA LGALGRPLVP PRATNTSASL DLDIRRGVVQ LWLCSDGVLR RVHVIASGNV RQQPSNLFSI TFRIDLGNIN GRVTITAPAQ ARALQRTPEP TVAAVRAGPI RSAPGAGSIV GQMNVQDAVI IIERSANQRW YRVRAPAATG WVSASLLAVP PALARQVPVT PNP
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