Gene Rcas_2582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2582 
Symbol 
ID5540064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3332275 
End bp3333363 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID640894709 
Productputative RNA methylase 
Protein accessionYP_001432676 
Protein GI156742547 
COG category[L] Replication, recombination and repair 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCCA CCCGTCACAC GTTCATTGCT CAGACGCAGC CCGGTTTCGA GGCGATTGCC 
GCAACCGAGA TTACCGCGCG CCTCGACGGT GCGCAGTTCA TCGATCTCCG GTCGGTTGCT
GACAAGAACG GCATGGTGCG CTTTGCTTTC TCCGGCGATC CGCGTGATCT CTTGCAACTG
CGGACGGTGG AAGATGTCTT TGTCGTGGCG GCGGAGGCGC GCGATCTGGC GCCGGGATTT
GCGGCATTGC GCCAGTTGGC GCATCTGGCG GCGACAGCGC CCGGCATCGA GCGCGCCATT
CATCTGGTGC GACGGGTCGA TCCTCGGCGC GGCGGCGAAG GGCGCATTCA TTACCGCGTT
ATTGCACGAC AGGTCGGACG TCTGCCGTAC CGCCGCGTCG ATGCACAGGT TGCCGTCGAG
CGCGGAATCG CCGCGCGCCC GGATCACCGC TGGCGACTTG TCGCCGACGG CGGGATTGAG
TTCTGGCTGG TGCAGTGGCC CGGTGAGGCG CTTCTCATGG TGCGGCTAAG CGATGAACGC
ATGCGCCACC GTGACTACAA AGTCGAGCAC CTCCCGGCAT CGCTGCGTCC GGCGGCTGCG
GCGGCGCTGG CATGGTTGAC GACGCCGCGC GATGATGATC GGTTCCTCGA TCCGATGTGC
GGCGCGGGGA CGATCCTGAT CGAGCGGGCG CATCTGGGGC GCTACCGCGC GTTGATCGGC
GGCGACATCG ACCCGGAAGC GGTTGCGACG GCGCGGGCGA ATATTGGATC ACGCTACAAG
CCGGTGTCCA TTCACGAATG GGATGCGCGC CGGTTGCCGC TCGACGCCGG TTCGGTCACG
GCGCTGGCGG TCAATCTGCC ATTCGGCGCA CAAATGGGAT CGCTCGAAGA GAATCGCACG
CTCTACCCGG AGTTCCTGCG CGAAGCGGCG CGGGTGCTGC GCCCCGGCGC GCGGCTCGTG
GCGCTCAGCG GCGACGCGCG CACCCTGAGC GACGCGCTGC GGCGGAACAA CCGCCTGGCT
CGCTGCGCAA CCTACCCTGT CCTCATCCTC GGCCGTCGCG CAGTGATTGT GGTGGCGGAG
CGAGGGTAG
 
Protein sequence
MPSTRHTFIA QTQPGFEAIA ATEITARLDG AQFIDLRSVA DKNGMVRFAF SGDPRDLLQL 
RTVEDVFVVA AEARDLAPGF AALRQLAHLA ATAPGIERAI HLVRRVDPRR GGEGRIHYRV
IARQVGRLPY RRVDAQVAVE RGIAARPDHR WRLVADGGIE FWLVQWPGEA LLMVRLSDER
MRHRDYKVEH LPASLRPAAA AALAWLTTPR DDDRFLDPMC GAGTILIERA HLGRYRALIG
GDIDPEAVAT ARANIGSRYK PVSIHEWDAR RLPLDAGSVT ALAVNLPFGA QMGSLEENRT
LYPEFLREAA RVLRPGARLV ALSGDARTLS DALRRNNRLA RCATYPVLIL GRRAVIVVAE
RG