| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2560 |
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| Symbol | |
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| ID | 5540042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3301925 |
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| End bp | 3302842 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894689 |
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| Product | luciferase family protein |
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| Protein accession | YP_001432656 |
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| Protein GI | 156742527 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000351517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATTA TAGCATATGC TTACAACGGA GGCAAATGGA ATCGTATGAG CCGCTCCCTT
GAAATTGGCG TCGTCTTCCC GCAAACGGAA ATTGGCGATG ATCCTGGAAT AATCCGCGAA
TATGCCCAGG AAGTCGAGGC GCTTGGTTAT CGCTACATCC TGGCATACGA CCACGTCCTC
GGCGCCGATC CGTCGATTCG TCCCGGCTGG AGCGGACCGT ACACGAGCGA GTCGATGTTC
CACGAGCCGT TGGTTCTATT CGGGTATCTG GCAGGGATCA CGACATCAAT CGGTCTGGCG
ACCGGCGTGA TCATCCTTCC GCAGCGACAG ACAGCGCTGG TCGCCAAGCA GGCGGCTGAA
GTCGATGTGC TGAGCGGCGG ACGGCTGCGG CTGGGTATTG GCATCGGATG GAATGAGGTG
GAGTATCAGG CACTGGGCGA GAACTTCCAC AACCGCGGCG CGCGGAGCGA GGAGCAGATC
GCCGTGCTGC GCGCCCTGTG GTCCGAGAAA GTCGTCACCT TTCACGGACG CTGGCACACA
ATCGAGGCAG CAGGACTCAA TCCACTGCCG CCACGTCGTT CCATCCCGAT CTGGATCGGC
GGATACGCTG AAGCGACCCT GAAGCGCGTG GCGCGGATCG GCGACGGCTG GATCACCTTT
CGCCCGCCGG ACGAGACGAC CCGAGCCGCG CTGGAACGTC TCGCCGGATA TGCCCGAGAT
GCCGGGCGTG ACCCTGCGAC GATCGGCATC GAGTCGCAGT TGAACCTGCG TTCGGTCGCA
GAAGAGCGCT GGCAGACGTA TATCGATGCC TGGCGCGCGC TCGGAGCGCA TTATCTCTGC
CTCAATACCA TGGGTATGGG ATTGACGCGC ATTGATCAGC ATCTGGCGGT GTTACAGCGC
GCGGCGCACC TCAGATGA
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| Protein sequence | MRIIAYAYNG GKWNRMSRSL EIGVVFPQTE IGDDPGIIRE YAQEVEALGY RYILAYDHVL
GADPSIRPGW SGPYTSESMF HEPLVLFGYL AGITTSIGLA TGVIILPQRQ TALVAKQAAE
VDVLSGGRLR LGIGIGWNEV EYQALGENFH NRGARSEEQI AVLRALWSEK VVTFHGRWHT
IEAAGLNPLP PRRSIPIWIG GYAEATLKRV ARIGDGWITF RPPDETTRAA LERLAGYARD
AGRDPATIGI ESQLNLRSVA EERWQTYIDA WRALGAHYLC LNTMGMGLTR IDQHLAVLQR
AAHLR
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