| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2547 |
|---|
| Symbol | |
|---|
| ID | 5540029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 3287777 |
|---|
| End bp | 3288859 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640894677 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001432644 |
|---|
| Protein GI | 156742515 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.476025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.311461 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTCTC TTCCGATTCT CGATCTTCAC TATCATCCGC ACCTTTCCGC CCGAACCGAT
TATGGGATTG CGCTGATCGG ATGCGGCAGG ATTGCGAACT ATGCCCATCT GCCTGCATAT
AAATTGCATG GTTTGCGCGT GGTCGGCTGT TACGACATCG ACCGTCAGGC GGCGCAGGAA
ACCGCTGCGC GTCATGGGAT TCCGCGGGTA TATGAGACGC TCGATGCCGC ACTCGCCGAT
CCCGATGTGC AGATTTGCGA CATTGCAGTA CCCGCCTGGC ATCAACGCGC CATCGACGAA
CAGGCGGTCG CCGCCGGCAA GCACCTCCTC TGCCAGAAGC CGCTTTCCGA GAACCTCGCG
GATGCCGAAG CCATTGTGGA CATAGCGCGA CGCGCCGGGC GCAAAGTCGC CGTCAGTCAA
CAGATGCGCT GGAGTCCCGC GATTGCCGCT GCGCGTGATC TCATTCAGCG TGGGTTTATC
GGGCAACCGG CCGCTGCGCA GATTCTGGTA TCGATCACTA CGCCATGGCA TATGTGGCCC
TGGCTTCAAG CGCATCCCTA CCTCGATCTG ATGTGCCACA GCATCCACTG TCTCGACAGT
CTGCGCTACC TGTTCGGCGA CCCGGCGTGG GTGACGAGCC GCCATGCCCA CTATCCGGGG
CAACAAGAAC GCGCCGAAAC GAAAACGATC ACGGTGCTGG ATCACGACTC GGGGTTACAG
GCGTTGCTTG CCGTCAATCA TCATGACCAC AGCGGCGACG CCTATGCCAC GTTTCGTTTC
CTGGGCACCG AAGGAGTGAT CAAGGGAATC ATCGGGCTGC TCTACGACTA TCCGCACGGC
AGACCAGACT CGTTGCAGTG CCATTCCACG ACGACCGCGC CGGACATCTG GTTCGATGTG
CGCCTCGAAG ATCGCTGGAT TCCCGATGCG TTCATTGGTC TAATGGCATC GCTGATGGAA
GCGATGCAGA TGGATGGAAC GCCGCTGACC GACGCCGCCG ACAACCCGCA TACGCTTCGC
CTCGTGCACG CAGCATATCG CTCCGCCGCC GATCATCGGT CGGTGCGCCC CGCTGAATTA
TAA
|
|---|
| Protein sequence | MESLPILDLH YHPHLSARTD YGIALIGCGR IANYAHLPAY KLHGLRVVGC YDIDRQAAQE
TAARHGIPRV YETLDAALAD PDVQICDIAV PAWHQRAIDE QAVAAGKHLL CQKPLSENLA
DAEAIVDIAR RAGRKVAVSQ QMRWSPAIAA ARDLIQRGFI GQPAAAQILV SITTPWHMWP
WLQAHPYLDL MCHSIHCLDS LRYLFGDPAW VTSRHAHYPG QQERAETKTI TVLDHDSGLQ
ALLAVNHHDH SGDAYATFRF LGTEGVIKGI IGLLYDYPHG RPDSLQCHST TTAPDIWFDV
RLEDRWIPDA FIGLMASLME AMQMDGTPLT DAADNPHTLR LVHAAYRSAA DHRSVRPAEL
|
|---|
| |