| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2537 |
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| Symbol | |
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| ID | 5540019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3272826 |
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| End bp | 3275207 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894667 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432634 |
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| Protein GI | 156742505 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.22202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000191831 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAGAC CTCGCTGGCG CAAGGTGTTC GCTGATGTCT GGAGCAACAA GACACGCACC
GTTCTGGTAG TGCTGTCGAT TGCCGTCGGT GTGTTTGCAA TTGGTGCGAT TGCCGGCGCC
AATGCGTTGC TGACCCGCGA AATGACCGCA GCTTATATGG CGGTCAATCC TGCCGATATC
ACAATCTCTT CTGATCCGTT CGATGATGAA TTCGTCCGCA CAGTGCGCCG AATACCCGGC
GTTGCGGATG CCGTCGGCGG TCTCTCCGTC GGTGTGCGCT TCCAGATCGG ACCCGATCAG
TGGCGCAATA TGACTATCTC CATCGTGGAC GACTTCAAGG ATATGCGGAT CAACAAGGTT
TATCCGGTGG AAGGCGCCTG GCCCCCTGCA CATCGTGAAC TGCTTGTCGA ACGCGCATCG
CTGCCGCTCA CCGGTGCGAA GATTGGCGAT ACCGTGACCA TCCGGCTGCC TGATGAAACG
CTGCGCCGGA TGCGAATCGC CGGCACAGTC GCAACGCCAA ACCTCGCGCC AGCAGCGCTC
ACCAACCAGA CCTATGCGTT CGCAACTCTC GCAACCCTCG AATGGCTCGG TCGACCGCAG
TATTATACCG AGCTGCACAT CACAGTGACC GGCGACCGCT TCAACAAGGA GCATATTGCT
GAGGTCGCCG CCCTGGTGCG GAACAAGATC GAGAGCAGCG GTCGCACGGT TTACTTTACC
TACCTCCCGG AACCGGGACG ACACCCGGCG CACCAGGTGC TGCAACCGTT GTTCCTTTTG
CTCAGCTTTC TTGGCGCGCT TTCGTTGTTT GCCAGTTGCT TCCTGGTTGT CAATACCATT
TCGGCGCTGC TGACCCAACA GGTGCGGCAG ATCGGCATGA TGAAAGCCAT CGGCGCGCGC
ACGAGCGATG TCATCGTGAT GTACCTGGTG AGTGTGCTGC TGCTGGGAGT CCTGGCGCTG
CTGCTGGCAA TGCCGCTGGC ATATCTGGTT GCCGCCGGTT TGACGATCCT TATTTCGGGA
CTGATGAACA CCGATGTGAC CAGCCTGGCG ATGCCGCTCG AAGTCTGGCT GATCATGATC
GCTGTTGGTC TGCTGGTACC GCTGCTGGCG GCGCTGGCGC CGGTCTTCGG CGGCGCGCGC
GTAACGGTGC ACGAAGCGAT CAGCGGCTAT GGGCTGGGGA AAGGGCGCTT CGGGCGCGGT
CGCATCGATC GTCTGCTGCA ACGCATCCAT GGTCTCTCCC GTCCGTTGAT GTTGTCGCTT
CGCAACACCT TCCGGCGCAA AGGGCGCCTG GCGTTGACGA TGATGACGCT CACCCTCTCC
GGGATCATCT TCATATCGGT CTTTAGTGTG CGCAATTCGT TACAGTTGAC GCTCGACGAT
GCGTTGAAAT ATTTCAATTT CCATATTCTG GGGGTATTCA ACGGATTCTA TCGCACCGAA
CAGATCGAGC GCGAGACGCT GGCAGTGCCC GGCGTGATTG CCGCTGAGAG TTGGGGCTTT
GATATGGTGC GCCGGGTTCG CCCCAACGAC ACGGAAAGCG ACTCGATCAT CATGTATGCC
GTTCCTGCCG AAACGCGCAT GATCATCCCG ACGGTCCTTG AAGGACGATG GTTGCTCCCC
GAAGATGAAA ACGCGCTGGT GATTAATTCG AGCGTGCTCG GTCTCGAACC CGACATCAAG
GTTGGCGATA CGGTGACGTT GAAGATCGAC CGGCGCGAAA GTGAGTGGAA GGTTGTCGGC
ATTGTGCGCG GCATTGGTGG GCAGGCGATG GTCTATACCC ACTATCCGTA CTTTGCTCGC
ATTCGCGGGT TCACCGGACG CGCCATTGCA GTGACAGTGC AGATCGACCC GTCCGACGCC
GCAAACCAGG AGCGGGTGGC AAAAGAACTC GAAGCGCACT ACAAATCGGT TGGCATGCGG
AGCATGATGC AGACAACGGC GATCATCCGT CAGCAGAATG AAATCTTCTT CAATATTCTG
ATCTCGTTTC TGCTGGCAAT GGCGCTGCTG CTGGCAACCG TCGGCGGGTT GGGTCTGATG
GGCACGATGA GCATTAATGT CCTCGAACGC ACCCGCGAGA TCGGCGTGCT CCGCGCGATT
GGCGCCTCAA ACGGTGCCGT GTGGCGCATT GTTGTCACAG AAGGAATCAT TATCGGGGCG
CTGAGCTGGG CGTTGGCGAT GATCGTTGCT GTGCCGCTCG CGAAAGTGAT TTCCGACAGC
GTGGGCATGG CGTTCTTCCA GACGCCGCTC AGTTTCTCAT TCTCGATTGG CGGCGCGCTC
ATCTGGCTTG CGCTCGTAAC GATCATCGCC GCAATTGCCA GCCTGCTGCC GGCATACAAT
GCAACGCGCC TCACCGTGCG CGAAGTGCTG GCGTATGAGT GA
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| Protein sequence | MLRPRWRKVF ADVWSNKTRT VLVVLSIAVG VFAIGAIAGA NALLTREMTA AYMAVNPADI
TISSDPFDDE FVRTVRRIPG VADAVGGLSV GVRFQIGPDQ WRNMTISIVD DFKDMRINKV
YPVEGAWPPA HRELLVERAS LPLTGAKIGD TVTIRLPDET LRRMRIAGTV ATPNLAPAAL
TNQTYAFATL ATLEWLGRPQ YYTELHITVT GDRFNKEHIA EVAALVRNKI ESSGRTVYFT
YLPEPGRHPA HQVLQPLFLL LSFLGALSLF ASCFLVVNTI SALLTQQVRQ IGMMKAIGAR
TSDVIVMYLV SVLLLGVLAL LLAMPLAYLV AAGLTILISG LMNTDVTSLA MPLEVWLIMI
AVGLLVPLLA ALAPVFGGAR VTVHEAISGY GLGKGRFGRG RIDRLLQRIH GLSRPLMLSL
RNTFRRKGRL ALTMMTLTLS GIIFISVFSV RNSLQLTLDD ALKYFNFHIL GVFNGFYRTE
QIERETLAVP GVIAAESWGF DMVRRVRPND TESDSIIMYA VPAETRMIIP TVLEGRWLLP
EDENALVINS SVLGLEPDIK VGDTVTLKID RRESEWKVVG IVRGIGGQAM VYTHYPYFAR
IRGFTGRAIA VTVQIDPSDA ANQERVAKEL EAHYKSVGMR SMMQTTAIIR QQNEIFFNIL
ISFLLAMALL LATVGGLGLM GTMSINVLER TREIGVLRAI GASNGAVWRI VVTEGIIIGA
LSWALAMIVA VPLAKVISDS VGMAFFQTPL SFSFSIGGAL IWLALVTIIA AIASLLPAYN
ATRLTVREVL AYE
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