| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2519 |
|---|
| Symbol | |
|---|
| ID | 5540001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 3249795 |
|---|
| End bp | 3250526 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640894650 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001432617 |
|---|
| Protein GI | 156742488 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.54258 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGC TTTCTCTGCG CGCCATTCCT GCAACCAGGC GCGCATCTGC GCTCTACTGC
GCAACCAGCG GCAGCGGGTT TCCGCTGTTG TTCATTCACG GCTTTGGCGC CAGTGGTGAT
GAGTTTCAGC CGCTTGCCAG CCAGCTTGCC AAACGGTATC AGACCATTGT GCCAGATCTG
CGCGGGCACG GTCGGAGCCG CCGGCTACCG CTCGCCGACA GCATCGAGCG CATGGCGACA
GATGTGGGAG ATTTGCTCGA TCTCCTCGGC ATTGGTCGTA CCTTTGTCGT CGGTCACGCG
GGTGGATCGG CGATTGCAGC GCACCTTGCC GCCGATCAGC CAGCGCGTGT GTGTGGACTC
GTGCTCATTT CACCACCTGC GATCACACCA CCGGAACGCC GATCATTCGG CGCGCGTCTG
CGCGATGGTT TGAGCGCCGC GTTCAACCGC AACGACAATG CTGGCGACCA CGATGCTCAG
GCATGCCAGC GCCTGCTCCA GAAGGCTGAT TATCGTGCTC AATTGCGCTC GATTACGGCG
CCTACGCTGG TCATCGCCGG GGATCACGAT CCGAACCCAA CCGCGCGTCA GGTGCGCGAG
ATCGCACATA TGGTCGGCAA TGGCACGTCT GTGATCGTGA GAGGAGGCAG CGCCAGCCTG
TTGCCCAAAC ACGCCGACGC ATTGATCGAT GTGCTGGCGC CCTGGTTTGA GCAGCAGGAG
CGCACTGCAT GA
|
|---|
| Protein sequence | MTALSLRAIP ATRRASALYC ATSGSGFPLL FIHGFGASGD EFQPLASQLA KRYQTIVPDL
RGHGRSRRLP LADSIERMAT DVGDLLDLLG IGRTFVVGHA GGSAIAAHLA ADQPARVCGL
VLISPPAITP PERRSFGARL RDGLSAAFNR NDNAGDHDAQ ACQRLLQKAD YRAQLRSITA
PTLVIAGDHD PNPTARQVRE IAHMVGNGTS VIVRGGSASL LPKHADALID VLAPWFEQQE
RTA
|
|---|
| |