Gene Rcas_2504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2504 
Symbol 
ID5539986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3228872 
End bp3229639 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content62% 
IMG OID640894635 
Producthypothetical protein 
Protein accessionYP_001432602 
Protein GI156742473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAT CACGTTCTTC ACTGCTCATT GCCGCGCTGA CGGTGCTGTT GCTGGCATCG 
GCGCTCGCGC TCAGCGCACC GACATCGTCG AGTCAGACGG AGGAGCCGAT TCTGATTCTG
CCGACCGTTC CGCCGACCCC GACGGTTCCG CCCGCTCCTC CGGCGCCTGC GGACGTCACA
GCGCCGCAGT CCGGCGCGAC CCTGGCAACC GCGTCATTCG AGGGGTCCGA TGCGCTGAAC
GGTTGGCGGA TCGTCGATCT CGAGGAGGCA CCGGCGGAAC GACGAGCGCT GTGGGTTGTC
GTCGATGGCG TGTTGCGTCA GGATCGAACG GTTCCGCCGC TGCGCGATCC GAGCATCCAC
GAAACGGCAG CGCTCATCGG CGATGCGTCC TGGAGCGACT ATACCATCAG CGCCGGTTTC
TACGATCAGG ACAATGCCAA TGTCGGACTG ATCGCGCGCT ATCAGGACGG ATCATACTAC
CGCTATCGAA TCATTCGGAA TGGGTATGAG GACCGCCCAA AGCACCAGAT CGAGCGCGTC
TCCGATGGGA CGGTGACGCT TCTGGCGAGC CTCGATGCGC CGGGGTATGA ACCACGCCGA
TGGAACACGA TCATGTTCAG TGTCAACGGC GATCGGTTGC AGGCGTTTTT CAACGGTCAG
ATGACGATTG AGACGCGCGA TGCGCGCCTG ACATCCGGCG CCGCCGGGTT GTACACGCGC
GCCATTGGCG GCATGGTGTT CGATACTGTG ACGATTACCC AACCGTAG
 
Protein sequence
MKQSRSSLLI AALTVLLLAS ALALSAPTSS SQTEEPILIL PTVPPTPTVP PAPPAPADVT 
APQSGATLAT ASFEGSDALN GWRIVDLEEA PAERRALWVV VDGVLRQDRT VPPLRDPSIH
ETAALIGDAS WSDYTISAGF YDQDNANVGL IARYQDGSYY RYRIIRNGYE DRPKHQIERV
SDGTVTLLAS LDAPGYEPRR WNTIMFSVNG DRLQAFFNGQ MTIETRDARL TSGAAGLYTR
AIGGMVFDTV TITQP