Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2504 |
Symbol | |
ID | 5539986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3228872 |
End bp | 3229639 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640894635 |
Product | hypothetical protein |
Protein accession | YP_001432602 |
Protein GI | 156742473 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAT CACGTTCTTC ACTGCTCATT GCCGCGCTGA CGGTGCTGTT GCTGGCATCG GCGCTCGCGC TCAGCGCACC GACATCGTCG AGTCAGACGG AGGAGCCGAT TCTGATTCTG CCGACCGTTC CGCCGACCCC GACGGTTCCG CCCGCTCCTC CGGCGCCTGC GGACGTCACA GCGCCGCAGT CCGGCGCGAC CCTGGCAACC GCGTCATTCG AGGGGTCCGA TGCGCTGAAC GGTTGGCGGA TCGTCGATCT CGAGGAGGCA CCGGCGGAAC GACGAGCGCT GTGGGTTGTC GTCGATGGCG TGTTGCGTCA GGATCGAACG GTTCCGCCGC TGCGCGATCC GAGCATCCAC GAAACGGCAG CGCTCATCGG CGATGCGTCC TGGAGCGACT ATACCATCAG CGCCGGTTTC TACGATCAGG ACAATGCCAA TGTCGGACTG ATCGCGCGCT ATCAGGACGG ATCATACTAC CGCTATCGAA TCATTCGGAA TGGGTATGAG GACCGCCCAA AGCACCAGAT CGAGCGCGTC TCCGATGGGA CGGTGACGCT TCTGGCGAGC CTCGATGCGC CGGGGTATGA ACCACGCCGA TGGAACACGA TCATGTTCAG TGTCAACGGC GATCGGTTGC AGGCGTTTTT CAACGGTCAG ATGACGATTG AGACGCGCGA TGCGCGCCTG ACATCCGGCG CCGCCGGGTT GTACACGCGC GCCATTGGCG GCATGGTGTT CGATACTGTG ACGATTACCC AACCGTAG
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Protein sequence | MKQSRSSLLI AALTVLLLAS ALALSAPTSS SQTEEPILIL PTVPPTPTVP PAPPAPADVT APQSGATLAT ASFEGSDALN GWRIVDLEEA PAERRALWVV VDGVLRQDRT VPPLRDPSIH ETAALIGDAS WSDYTISAGF YDQDNANVGL IARYQDGSYY RYRIIRNGYE DRPKHQIERV SDGTVTLLAS LDAPGYEPRR WNTIMFSVNG DRLQAFFNGQ MTIETRDARL TSGAAGLYTR AIGGMVFDTV TITQP
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