| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2467 |
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| Symbol | |
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| ID | 5539948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3167709 |
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| End bp | 3169028 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894597 |
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| Product | DNA uptake Rossmann fold nucleotide-binding protein |
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| Protein accession | YP_001432565 |
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| Protein GI | 156742436 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGAAC ACGAACTGAC GCCTGATACG CAGGCGATCC TGTTGCTCTG CGGAACATTC
GGCAGACGCG GGTCGAGCGT CGCACCGCTG AGTGCAGCGG AGTATCATGC CCTGGCGCTC
TGGTTGCATG CGCAGCAGAT GCGTCCAGGT GATCTGTTGC ACCCGGAAGG GGTTGCGTGC
ATCCAATCGA TGCCAGGCGC TCCGGTAGTC CAGGAACGGC TGCTGGCGCT GCTGGCGCGC
GGTGGAGCGC TGGCGCTTAC AGTCGAAGGC TGGAGCAACA AAGGTCTGTG GGTGATGAGC
AGAAGCGATC CCGACTATCC GCAGCGGTTG CGGGCGCGTT TGGAACGCAT TGCACCACCG
TTGCTCTACG GCGCTGGCAA CCGTCGTCTG CTCCAAAACG GCGGACTGGC AATCGTTGGA
TCACGCCGCG TTACCGAAGA TGCAATCGCC TTTACCTGCG ATATTGCCCG CAGGTGCGCC
ATACAGGGCA TACCGGTCAT CTCTGGCGCC GCGCGGGGGG TGGACAGCGA AGCGATGCAG
GCAGCGCTTG CAGCAGATGG CGCTGCGGTC GGCGTGCTTG CGGATAGCCT GCTCAGAGCG
GCAGTATCCG GGAAGTATCG TCAGGCGTTG CGGAACGGCA ACCTGGCGCT GGTCACTGCA
TATGATCCCG AAGCGGGTTT TTCTGTTGGC AACGCCATGG GGCGCAATAA GTACATCTAT
ACGTTGAGCG ATTATGGATT GGTGGTGAGT GCTTCATTAG GCGAAGGCGG AACATGGGAC
GGCGCCATCG AATGTCTGAA AAAGCAGTGG GTTCCGCTCT TTGTCTGGTC GAGCGACAAA
GCGGGACCGG GCAATCAACG CCTGTGCGAG ATGGGCGCTA TCTCGCTGAG TCAGGAGTTG
TTGTCGAAGT ATGCATCGCT GCACCATCTC TTCAATGATC TATCCAGAGC ATCGGTTCCA
ACACCCCTAC TGCGAGAGAG CGAAGCGATC AATGAGCATT CCGCCAGAAT GTCGCCTGGC
AAGGGGATGA ACACGACTGC TGGCAACGAG CGCAGCGTCC ATGATACTTC ATCGCTCGAT
CAGGCAACGC TGGCGTTGAT GCCTGTCGAT ACGAATGGCG CAGCACCGGC CATCGATTTG
TTTCCGATTG TCTGGCCCCA TCTCGTCCAG GCGCTGCGAG TTGCACAGAC CGAGCGCGAG
ATTGCGCAGC ACTGCGGCAT CGAGCCGCAG CAGGCACGTG CCTGGCTGCA ACGCGCTGTC
CAGGAAGGTC TGGCGGTGAA GTTGACCCGC CCGATACGCT ACGTGTTGCA CAAACCATAG
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| Protein sequence | MVEHELTPDT QAILLLCGTF GRRGSSVAPL SAAEYHALAL WLHAQQMRPG DLLHPEGVAC
IQSMPGAPVV QERLLALLAR GGALALTVEG WSNKGLWVMS RSDPDYPQRL RARLERIAPP
LLYGAGNRRL LQNGGLAIVG SRRVTEDAIA FTCDIARRCA IQGIPVISGA ARGVDSEAMQ
AALAADGAAV GVLADSLLRA AVSGKYRQAL RNGNLALVTA YDPEAGFSVG NAMGRNKYIY
TLSDYGLVVS ASLGEGGTWD GAIECLKKQW VPLFVWSSDK AGPGNQRLCE MGAISLSQEL
LSKYASLHHL FNDLSRASVP TPLLRESEAI NEHSARMSPG KGMNTTAGNE RSVHDTSSLD
QATLALMPVD TNGAAPAIDL FPIVWPHLVQ ALRVAQTERE IAQHCGIEPQ QARAWLQRAV
QEGLAVKLTR PIRYVLHKP
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