| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2448 |
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| Symbol | |
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| ID | 5539929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3144944 |
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| End bp | 3146119 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894578 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432546 |
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| Protein GI | 156742417 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.373683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.317121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGCA CATGGACCTC GGAGATGACA ACCCTGACCG ACAGCGCGAC CGGTCGCACC
ATCCGGCAGT TGACCGCTAT CGGCAACAAT GTGCATCTCT ACTTTACCGA GAATTCATTC
GACGCCGTCG AACCGGCGAT CATTTTTCTA TCGGACCGCG CCAGCGGTGA GGATCGCGCG
CCGCACGAAG ATCCGCGCTA CAACGTCTTC CGCCTGGACC TGGTTTCTGG CGAGATCATG
CAGTTGACCG ACGAGCCGGA AGGAGTTCAC AGCGTGACCA AAACGCCGGA TAGTCGGATC
ATCGTCTATA TTGTCGGGAA TCGTGTGCGC GCGTTCGATA CGGCAACCGG TGTTGCCACG
ACGATCTACG AAGAAACCGA CCCCTTTTCG CTCGGCGCGC CGTCGATTGC TCCCAACCGC
CGGTATGTCG CATTCTGCCG CAATGAGCAG GTAGACGTGC CGCGCGGACC AAACTATAGC
GGCTTCAAGG AGAGTTTCTA CCGAATCAAG GATGGCCGGG TGACGATTGC GTATCTGGAC
GGCTCGCAGG CGTTCGACGT CTGGCGTGAT ACGCATTGGC TGGGGCACTT CCAATTCTGC
CCCGTTGATG CGACGCTTGG CAGTTTCTGC CACGAAGGTC CATGGCATCT GGTGACGCAG
CGTATCTGGC TTCTCGATGT CGTGGCGCGC GCGGCAGTTC CTTGCTTTCG TCAAACCGAG
GAGGACTCGG TCGGGCACGA GTTCTGGACG CAGGATGGTC TGATCGTTTT CGATAATCGG
GGACCCGGAC ACGACGGGAC GATCACCAGC CATCGCGCGC AGGCGGTGGC GGTTGATGTC
GCTGTGAAGT CAACTGCATC GACTTCCTTC CGTCCGTATG TCGGTCTGGC AAATCGGCGT
GGCGACGTCA TTCGGCGGAT CGATATGCCC TACTACACCA ACCACTACCA TGCCAGCCCC
GATGCGACAC GGTTGGTTGG CGACGATGTG GATGATCTGG TACTGATTGA TATTTCCGGC
AATGAAGCGC GCTTGGAAAC ACTGGTGCGC AACCACGGAA CCTCATGGCA CACGCAGAGC
AGCCACTGCC ATCCGACCTG GAGTTGGGAC GGTTCTCGCA TTCTCTACGC TTCTGATCGG
GACGGCAGGG TGAACCTGTA CCTTGTCGAA CTGTAA
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| Protein sequence | MPRTWTSEMT TLTDSATGRT IRQLTAIGNN VHLYFTENSF DAVEPAIIFL SDRASGEDRA
PHEDPRYNVF RLDLVSGEIM QLTDEPEGVH SVTKTPDSRI IVYIVGNRVR AFDTATGVAT
TIYEETDPFS LGAPSIAPNR RYVAFCRNEQ VDVPRGPNYS GFKESFYRIK DGRVTIAYLD
GSQAFDVWRD THWLGHFQFC PVDATLGSFC HEGPWHLVTQ RIWLLDVVAR AAVPCFRQTE
EDSVGHEFWT QDGLIVFDNR GPGHDGTITS HRAQAVAVDV AVKSTASTSF RPYVGLANRR
GDVIRRIDMP YYTNHYHASP DATRLVGDDV DDLVLIDISG NEARLETLVR NHGTSWHTQS
SHCHPTWSWD GSRILYASDR DGRVNLYLVE L
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