| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2403 |
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| Symbol | |
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| ID | 5539884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3097145 |
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| End bp | 3097669 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894533 |
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| Product | ThiJ/PfpI domain-containing protein |
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| Protein accession | YP_001432501 |
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| Protein GI | 156742372 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTCT CTGGGAAGCG CATTGCAATT CTGCTGGCGG AAGGCGTCGA AGACCTCGAG
TTCTATGTGC CGATGATGCG ATTGCAGGAA GAAGGCGCCG AGGTTGTGGC GGCCGGTCTG
GATCTGCGCC CGGTGCGCGG GAAGAATGGG CTGGAGATCA CGCCGACGAC GACGATTGCT
GAACTGCGCG CTGATGATCT TTTCGCACTG GTGCTGCCCG GCGGTTGGGC GCCGGATAAA
CTCCGCCGCT ATCGGGCGGT GACCGACCTG GTGCAGGCGA TGCATGCGGC CGGCAAGGTA
ATTGGAATCA TCTGCCACGG CGGATCGATT GCCATCTCGG CGGGAATCGT CGGTGGTCGT
CGAGCAACCG GCTCGCTCGG TATCAAAGAT GATCTGATCA ACGCTGGCGC CACCTGGGTC
GATGAAGCCG CCTTTCGCGA CGAGAACCTG GTCTGGGGAC GGGTGGTCGC CGACATCCCC
GCCTTCTGCC GCGAACTGGT GGCGGCGCTG GTCGAACAGG TATAA
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| Protein sequence | MRLSGKRIAI LLAEGVEDLE FYVPMMRLQE EGAEVVAAGL DLRPVRGKNG LEITPTTTIA
ELRADDLFAL VLPGGWAPDK LRRYRAVTDL VQAMHAAGKV IGIICHGGSI AISAGIVGGR
RATGSLGIKD DLINAGATWV DEAAFRDENL VWGRVVADIP AFCRELVAAL VEQV
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