| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2401 |
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| Symbol | |
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| ID | 5539882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3092677 |
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| End bp | 3093765 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894532 |
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| Product | polymorphic outer membrane protein |
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| Protein accession | YP_001432500 |
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| Protein GI | 156742371 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.456307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA CTACTCTTCG GCTTCTCTCC GCATTGCTGG TTTTGCTCTT CAAACTGACC
ATTGCCAATG CCAGCACCCC ATTGAGCGGA GGAGGCGTTG TCAATTCTGG CACGCTAACC
GTGAGGAACA GCACCTTCTC GAACAACACA GCAGGCAGCG GCGGCGGCAT TGTCAATTTG
AGCAGCGGCA CGCTGACCGT GAGTGACAGC ACTTTCTCTA ACAACACAGC AAACACCGGC
GGCGGCATCG ACAACGCTGG CGGTACACTG ACGGTGACCA ACAGCACCTT CTCCGGCAAC
GTCGCTACCT CAACTGGCGG CGGCGGCATC TGGAACAGCG GCGCGCTGAC GTTGACCAAC
AGCACCGTCT CTGGCAATAA CGCGAACAAT AGCGATGGCG GCGGCATCGC CAACTTCGGG
ACGCTCATCG TGGACCGCAT GACCTTTGCG AATGGCAGCG CCGCCGCCGG CGGCGGCATC
GCCAATTTCT CTGGCGGTAC GCTGCTGGTG AGCGATAGCG CCTTCACCGG CAACAGCGCC
TCGACCGGCG GCGGCGGCAT CGCCAATTAT GGCGGGGCCA CGGCGTCAGT CACCAACACG
ACCTTCTTCA CCAACACCGC CACCGGCGCT AGCGGCGGCG GCGGTCTCTG GAACAGCGGC
ACGCTCTCGG TCAATAACAG CACCTTCTCC GCCAACAGCG CCACAAACGG CGGCGGCGGC
ATCCGCATCG CTGGCGGCAG CGCGACGCTC AGGAACACCC TCATCGCCAA CAGCGCGAGC
GGCGGCGATT GTGTCGGGAC GCTGAGCGGC ACGAACAACA ACAACCTCAT CGAAGACACC
GGCGCGAACG CCTGCGGTTT GACCGACGGC GCGAACGGCA ACATCATCGG CGTCGATCCC
AACCTCGGCG CGCTGACCGG CTCACCCGCC TACTTCCCAC TCACTGCGAG CAGCCCGGCG
CTCAACGAGG GCGACAACGC CTCCTGCGCC GCCACCAACC AGCGCGGCGT CTTCCGTCCA
CAGGGAGGCC GGTGTGACAT CGGGGCGTTC GAGATGGTGT TCGTGTCGCT GCCCCTTGTG
GTTCGATAA
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| Protein sequence | MKRTTLRLLS ALLVLLFKLT IANASTPLSG GGVVNSGTLT VRNSTFSNNT AGSGGGIVNL
SSGTLTVSDS TFSNNTANTG GGIDNAGGTL TVTNSTFSGN VATSTGGGGI WNSGALTLTN
STVSGNNANN SDGGGIANFG TLIVDRMTFA NGSAAAGGGI ANFSGGTLLV SDSAFTGNSA
STGGGGIANY GGATASVTNT TFFTNTATGA SGGGGLWNSG TLSVNNSTFS ANSATNGGGG
IRIAGGSATL RNTLIANSAS GGDCVGTLSG TNNNNLIEDT GANACGLTDG ANGNIIGVDP
NLGALTGSPA YFPLTASSPA LNEGDNASCA ATNQRGVFRP QGGRCDIGAF EMVFVSLPLV
VR
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