| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2370 |
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| Symbol | |
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| ID | 5539851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3056127 |
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| End bp | 3057278 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894502 |
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| Product | oligogalacturonide lyase |
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| Protein accession | YP_001432470 |
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| Protein GI | 156742341 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.612375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAG GGACCGTCTA TCCTGCCGAA TGGCGCACCT TCACCGATCG ACATACCGGC
GTGCGCGTCA CCCAACTGAC CTCCCACAAG GCGCACAGCC ATCACCTCTA CTTCACGAAC
TCTGGCTGGT ATGACAACGG ACGCAAACTG TTGTTTGGCT CTGAGCGCTT CAATCGCGTC
AATCTCTACA GCCTCGATCT GGATGACGGG CGCATCACGC AGTTGACCGA CCTGGACCAA
CCGCCGCCGC CGGGAGAAAC ATCGTTCCTG TTTGCCAGCG TCAATCCGCA GCGCGCCGAG
GTCTACTTCT GGCATGGACG CGATCTGATT GCACTTGATC TCCAGACGCT CGATGAGCGG
CGTATCTACC GCGCCCCTGA TCGATTTCTG ACCAATATCA CCAACGTCAC CGCCGACGGC
AGATATGTTT GCACCGGTCT CTACGAAGAC CTCTCGGATC GGTTCACCAT CGATCTGTTG
CACGGATACG TCGGGTTTTA TGAGTACTGG GAGGCGCGCC CGTTATCGCA GATCGTCCGA
ATCGATGTGG ACAGCGGCGT TGCGGATGTC GTCTTTGAAG AAAACTACTG GATCGGTCAT
GTCAACACGT CACCGACGCT TCCCGACATC CTCACCTATT GCCATGAAGG ACCGTGGCAG
CAGGTCGATA ACCGCATCTG GGGTCTTAAT CTAGAGAACG GTCGGAACTG GAAAATTCGT
CCGTGCGCTC CCGGTGAACG GGTGGGCCAT GAATACTGGT TCGCCGATGG CGAGCGAATC
GGCTATCACG GACGCACTGC CGACGGTGAG CCGTTCTATG GATGCATCCG CTACGACAAC
GCTGATTGCA TCGAAGCGCC ATTCCCTGCC GACTCGACAC ACTTTCACAG CAACGATCTC
AGCCTGATCG TCGGTGATGG AACCCGTGCA TTCCCGTGGC TGTTGTTGTG GCGTTTTCAC
CATGGCGCAT TCGAAGGACC GCGCGCCGTC GCTTATCACC GCGGGTCCTT CCAGGTGCAG
ATCACCCATG TCCATCCGCG CTTCAGCCCG GATGGGCGCC AGATCGTCTA TGTGAGCGAC
GACAGCGGGT ACGGTAACCT GCACCTGATC GATACGCCTG ATTTCGATAG TCTGCCGCTG
CCGGCGGAGT GA
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| Protein sequence | MSKGTVYPAE WRTFTDRHTG VRVTQLTSHK AHSHHLYFTN SGWYDNGRKL LFGSERFNRV
NLYSLDLDDG RITQLTDLDQ PPPPGETSFL FASVNPQRAE VYFWHGRDLI ALDLQTLDER
RIYRAPDRFL TNITNVTADG RYVCTGLYED LSDRFTIDLL HGYVGFYEYW EARPLSQIVR
IDVDSGVADV VFEENYWIGH VNTSPTLPDI LTYCHEGPWQ QVDNRIWGLN LENGRNWKIR
PCAPGERVGH EYWFADGERI GYHGRTADGE PFYGCIRYDN ADCIEAPFPA DSTHFHSNDL
SLIVGDGTRA FPWLLLWRFH HGAFEGPRAV AYHRGSFQVQ ITHVHPRFSP DGRQIVYVSD
DSGYGNLHLI DTPDFDSLPL PAE
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