| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2358 |
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| Symbol | |
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| ID | 5539839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3042809 |
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| End bp | 3043939 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894491 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001432459 |
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| Protein GI | 156742330 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.072295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCA TGCTGCCGAT CATTCGCAAG GAGTTCATCC ATATTCTGCG GGACCGGCGC
GCGTTGATGA TCGCCTTTCT GACGCCGGTG ATCCAGATGA TCATTCTGGG CTACGCCGCC
ACGACCGATG TGCGCAATGT GCCGCTGGCG ATCTTCGACC AGGATCGCTC ACACCAGAGT
CGCGCGCTAA TCACCGCCTT CGTGCAATCT GGTCAGTTTA CGGCTCATGC TTATGTCAAA
TCAGAACAAG AACTGGCGGC GCTGATCGAC AGCGGGCAGG CGCGCGCCGG GCTGGTCGTG
CCGCCGGAGT ACGGGCGCGC GGTCACTGCC GGGCGGAACG CCGATATCCT GTTCATCCTC
GACGGCTCCG ACCCGTCGGT GGCATCGAGC GCGTTGGCGT CGGCACGGCT GATCGGTGCA
TCGCTGGCGA CCGGCGTGCG CGAAGAGATG CTGGCGCGAC GCGGCGCCAC GCTGGCGACT
ATGCCGGGAG CGCCGCAGGT GCGGGAGCGC GTCTGGTACA ATCCCGACAT GGACAGCGCC
GTGTTCATGG TGCCGGGGTT GATCGGGCTG GTGCTCCAAT TTCAAGCGAC GCTCCTGACC
GCCTCAGCAG TCGTGCGCGA ACGCGAGCGC GGCACGATTG AACAGTTGAT CGTTACCCCG
ATTCGCCCGT ATGAGTTGAT GGTGGGCAAA ATCCTGCCCT ACGCTGTCGT CGAACTGCTC
GTTGTCGGCG AGGTGTTGCT GGTGGGGACG CTATGGTTCG GCGTCCCCAT TCGCGGCAGC
CTGCTCCTGC TGGTGGCTAT TGCGTGCCTG TTCCTGGTTT CGACGCTGGC GCTCGGCTTG
CTGATTTCGA CAATTGCACG GACGCAGTTC GAGGCGTTTC AGTTGTCGTT CCTCACCCTG
CTGCCTTCGG TATTCATCTC CGGCTTCATC TATCCGATCG ACGCGATGCC TGCCGCGCTG
CAACTGATCA GCAAGGTCAT TCCGTTGACC TACTTTCTCG TCGTTGTGCG CGGCATCATC
ATCAAAGGGG TCGGCATTGA GGCGCTGCTG CCGCAGATCA TGGCATTGAC TGCGTTCGGC
GTCGCGCTGC TGACCATCGC CTCACTGCGG TTCAGGAAGC GGTTGGATTG A
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| Protein sequence | MSRMLPIIRK EFIHILRDRR ALMIAFLTPV IQMIILGYAA TTDVRNVPLA IFDQDRSHQS
RALITAFVQS GQFTAHAYVK SEQELAALID SGQARAGLVV PPEYGRAVTA GRNADILFIL
DGSDPSVASS ALASARLIGA SLATGVREEM LARRGATLAT MPGAPQVRER VWYNPDMDSA
VFMVPGLIGL VLQFQATLLT ASAVVRERER GTIEQLIVTP IRPYELMVGK ILPYAVVELL
VVGEVLLVGT LWFGVPIRGS LLLLVAIACL FLVSTLALGL LISTIARTQF EAFQLSFLTL
LPSVFISGFI YPIDAMPAAL QLISKVIPLT YFLVVVRGII IKGVGIEALL PQIMALTAFG
VALLTIASLR FRKRLD
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