| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2356 |
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| Symbol | |
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| ID | 5539837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3037750 |
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| End bp | 3038610 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894489 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001432457 |
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| Protein GI | 156742328 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.328671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.119199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAT TTTCGGCGCG TCGCGGCGGC GCACTGGGGC GCGAACTGCG CGGCGCATAT
GCCTTCATTG AACGGAACGC CAACCTGATC AAACGCTACT GGGCGTGGGA ACTGGTCTGG
CTGGCATACT CGATTGTAAA CGCGCTGTCG ATTACGTTCA TCGGGCGGGC ATCGGGCGAG
ATCACCGGCG CGACGATTGC GCCGGAGCAG GTGAATACCT TCATTTTGTT TCTGCTCGTC
GGAACGCTTG TGTGGCATTA TCTGTCGGTG GTGTTCGACT TGATCAGTGA GTCGATCCAG
TGGGAACGCT GGGAAGGAAC GATCGAGTAC ACCTTCATGG CGCCGATCTC GCGCCTGACG
CACCTGTTCG GGCAGGCGGC GTTCGCTGTC CTGTTTGCGG TGCTCCACAC TGCAATCATC
CTGGCAGTCG TGGCAGCCTT TTTTCGCATC GATCTGACCC GCGCCGACTT CGGCGCGATG
CTGGTCGTCC TGATCGCTGG CAGCACGAGT TTTATCGGGC TGGGGATGTT CGCCGCCATT
CTGCCGCTCC TGTCGCCAGA AAAGGGGTTG CAGATGACGA ATATTATCAA GGCGATGGTG
CTGCTCGTCA GTGGGGTCTA CTATCCGATC AGCGTCCTGC CGGAATGGTT GCAACCGCTG
GCGTACATCT CGCCGGCGAC CTACATGCTC GACGGGATTC GTGCAGCGCT GCTTGAAGGC
GCCGGTATCG AAGCGCTCTG GTCGGGGCGC ATCCTGCCGC TGTTGCTGAC CGGGTTGCTG
ACGATCCCGA CCGGATTGAT GGCGTTTATG CGCGCCGAGC GCTACGCCAA AGCGACCGGC
AGGCTCAAGC GGAACGGATG A
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| Protein sequence | MTTFSARRGG ALGRELRGAY AFIERNANLI KRYWAWELVW LAYSIVNALS ITFIGRASGE
ITGATIAPEQ VNTFILFLLV GTLVWHYLSV VFDLISESIQ WERWEGTIEY TFMAPISRLT
HLFGQAAFAV LFAVLHTAII LAVVAAFFRI DLTRADFGAM LVVLIAGSTS FIGLGMFAAI
LPLLSPEKGL QMTNIIKAMV LLVSGVYYPI SVLPEWLQPL AYISPATYML DGIRAALLEG
AGIEALWSGR ILPLLLTGLL TIPTGLMAFM RAERYAKATG RLKRNG
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