Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2350 |
Symbol | |
ID | 5539831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3033443 |
End bp | 3033937 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640894483 |
Product | hypothetical protein |
Protein accession | YP_001432451 |
Protein GI | 156742322 |
COG category | [R] General function prediction only |
COG ID | [COG2405] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.118065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.177262 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACA GACCGCGCCT GGTTGTGACT GACACAACGC CGCTGATCGC ACTGGCGCTG ATTGGGAAAT TGAGCCTCCT GAGCGATCTG TACGGCGAGG TGGCGGCGCC GCCAACTGTC TATGCCGAAG CCATCGCAGG CGCAGCAGGA CGAATCGACG CTGCTGACAT TCGCAATGCT TCCTGTGTAC GGGTACAACC GCTCTCTGAT CCACGACGCG CCGACGCGCT GGCAAACCTG GATCGCGGTG AAGCCGAAGC GATTGCGCTG GCTCAGGAAA TCAACGCCGA TCTGCTCATC ATAGATGAGC GTCTGGGAAG GCGATCAGCC CGGCATCTGG GACTGACTAT CACCGGCACA GTTGGCATTT TGCTCAAGTC CAAGGCGCTG GGCTACATAG AGACCGTGCA TCCGCTTCTG ACCATGTTAC AACAACGTGG CATCTATCTT GGCGATGCAC TGGTGCGCCG CGCACTGGAG ATCGCCGGAG AGTGA
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Protein sequence | MPDRPRLVVT DTTPLIALAL IGKLSLLSDL YGEVAAPPTV YAEAIAGAAG RIDAADIRNA SCVRVQPLSD PRRADALANL DRGEAEAIAL AQEINADLLI IDERLGRRSA RHLGLTITGT VGILLKSKAL GYIETVHPLL TMLQQRGIYL GDALVRRALE IAGE
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