Gene Rcas_2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2350 
Symbol 
ID5539831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3033443 
End bp3033937 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content59% 
IMG OID640894483 
Producthypothetical protein 
Protein accessionYP_001432451 
Protein GI156742322 
COG category[R] General function prediction only 
COG ID[COG2405] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.118065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.177262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACA GACCGCGCCT GGTTGTGACT GACACAACGC CGCTGATCGC ACTGGCGCTG 
ATTGGGAAAT TGAGCCTCCT GAGCGATCTG TACGGCGAGG TGGCGGCGCC GCCAACTGTC
TATGCCGAAG CCATCGCAGG CGCAGCAGGA CGAATCGACG CTGCTGACAT TCGCAATGCT
TCCTGTGTAC GGGTACAACC GCTCTCTGAT CCACGACGCG CCGACGCGCT GGCAAACCTG
GATCGCGGTG AAGCCGAAGC GATTGCGCTG GCTCAGGAAA TCAACGCCGA TCTGCTCATC
ATAGATGAGC GTCTGGGAAG GCGATCAGCC CGGCATCTGG GACTGACTAT CACCGGCACA
GTTGGCATTT TGCTCAAGTC CAAGGCGCTG GGCTACATAG AGACCGTGCA TCCGCTTCTG
ACCATGTTAC AACAACGTGG CATCTATCTT GGCGATGCAC TGGTGCGCCG CGCACTGGAG
ATCGCCGGAG AGTGA
 
Protein sequence
MPDRPRLVVT DTTPLIALAL IGKLSLLSDL YGEVAAPPTV YAEAIAGAAG RIDAADIRNA 
SCVRVQPLSD PRRADALANL DRGEAEAIAL AQEINADLLI IDERLGRRSA RHLGLTITGT
VGILLKSKAL GYIETVHPLL TMLQQRGIYL GDALVRRALE IAGE