Gene Rcas_2348 details

Gene Information

• Locus tag: Rcas_2348
• ID: 5539829
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Roseiflexus castenholzii DSM 13941
• Kingdom: Bacteria
• Replicon accession: NC_009767
• Strand: +
• Start bp: 3031884
• End bp: 3032648
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640894481
• Product: hypothetical protein
• Protein accession: YP_001432449
• Protein GI: 156742320

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.389344
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.18746
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTTTTCA ACCCTGATCC GCCTGACGAA ACGCGGCTTT ACCAGAACTC GGCGCACGCC 
GAAGGCGGCG GCGATGCGCG CGCAGAAAAT CAGGGCGCCG ACGCCACGAC GCCGCTGGCG 
CAAGCCCGCC GCACCTATAT CGGCTCGGCG CATGCCGAAG GCGGCGGCAA CGCCACAGTC 
GTCAATGCGC CAACGCCAGA CCCCACAGCG CGCCCTGAAC CGGCGACGGT GCTGGCGGTC 
TACGCCTCCC CTCCTGGCAG CGCGCCACTG CGCTGGGAAC GCGATGCGCG CGCGTTGCGC 
GATGCGCTGG CGCCCTACCC CGACCGCTTT CGCGTCGAGA TTCTGCCGCT GGCGACGCCG 
GAGGACGTGC AACGCGCGTT GCTGCGCTCT CGTCCGCGCT ACCTGCACCT CTTCGCCCAC 
GGCGTCGCCT CTGGCGTGCT GCTCGACGAC GGCGAGGACG GGCGCGGCTG GATGCTCCCC 
TACTCGCTGC TTGCGGAGAT GGCGCGGCAC GCGCCCGGTC TGCGCTGCGT GCTCCTCAGC 
GCCTGCGACT CAGCCTTCGC TGCAAGCGTC GCCGGCAGCG GCGAACCCCG CCTGATCGCT 
ATGCGCGGGC AGGTCAGCGT CGACGCCGCC ATTGCCTTCG CCGAAGGATT TTACGAGGCA 
ATCGCCGCAA ACGAGGATAC GCCAATTGAT GCGGCATTCG CCCAGGGACT GATCCGCCTG 
AAACTGCGCG CGCCGCAGGA TGCCGACAAA CCGTTGCTGA CGTAA 

 

Protein sequence

MLFNPDPPDE TRLYQNSAHA EGGGDARAEN QGADATTPLA QARRTYIGSA HAEGGGNATV 
VNAPTPDPTA RPEPATVLAV YASPPGSAPL RWERDARALR DALAPYPDRF RVEILPLATP 
EDVQRALLRS RPRYLHLFAH GVASGVLLDD GEDGRGWMLP YSLLAEMARH APGLRCVLLS 
ACDSAFAASV AGSGEPRLIA MRGQVSVDAA IAFAEGFYEA IAANEDTPID AAFAQGLIRL 
KLRAPQDADK PLLT