| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2340 |
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| Symbol | |
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| ID | 5539821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3018836 |
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| End bp | 3019615 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640894473 |
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| Product | cell wall anchor domain-containing protein |
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| Protein accession | YP_001432441 |
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| Protein GI | 156742312 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.13692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAGCA AGTCGTGGAT TCTTCTCCTG CTCGGCGCGC TGATCGCGCT GGCCGTGGCG
CCGGCGGCAT TCGCCCAGGT CGCCACAGCC AAGGTGCGTG TCATTCACGC CTCGCCGGAC
GCTCCGGCTG TTGATGTGAT TGTCAACGGC AACAGGGCGC TCACCAACGT TCCGTTCTTC
GCCGCCAGCG CCTATCTCGA TCTGCCGGCA GGCAGCTACG ACATCCAGGT TGTTCCGGCA
GGCGCCACGT CGCCGGTCGT CATCGATGCG AAGGGGGTTC GAATCGAGGC TGGCAAAGCG
TACACCATCG CCGCAACCGG CAAACTGGCA GAGATCAAGC CGACCATTCT GATGGACGAC
CTGACGGCGC CGGCAGCAGG TAAGGCGCAT GTGCGCGTGA TCCACTTCTC GCCGGATGCG
CCGGCGGTGG ACATCAAGGT TGCCGGTGGT CCGACGCTGA TCTCGAATCT GGCATTCCCG
AATGCCAGCA ACTACCTGCC GGTCGATGCC GGTTCGTATG ATCTGCAAGT CACTCCGGCG
GGTGGCACTG CCGTCGTGCT GGACTTGAAA GGCACGCGCC TGGAGGCCGG CAAGATCTAC
GACGTGTTCG CCGTCGGCGA GTTGGCGAAC ATCAAGGTCG AGGTCGCCGT AACGACGCCA
GCCGCCGCTC CGGCAGCGCT GCCGCGCACC GGCGGCGAAA CGGGCATCGC AATGTGGGCG
CTGGTTGCGG CTATGGCGCT GATCGGCGCA GGTCTGGTGA TGCGCCGCCG CGTGGCTTAG
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| Protein sequence | MRSKSWILLL LGALIALAVA PAAFAQVATA KVRVIHASPD APAVDVIVNG NRALTNVPFF
AASAYLDLPA GSYDIQVVPA GATSPVVIDA KGVRIEAGKA YTIAATGKLA EIKPTILMDD
LTAPAAGKAH VRVIHFSPDA PAVDIKVAGG PTLISNLAFP NASNYLPVDA GSYDLQVTPA
GGTAVVLDLK GTRLEAGKIY DVFAVGELAN IKVEVAVTTP AAAPAALPRT GGETGIAMWA
LVAAMALIGA GLVMRRRVA
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