| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2322 |
|---|
| Symbol | |
|---|
| ID | 5539803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 2992991 |
|---|
| End bp | 2994235 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640894455 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001432423 |
|---|
| Protein GI | 156742294 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1993] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.302959 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAG GCGAGCCGCT TCAACGTGTG CGCATTTATC TTAGCGAACG CGACAGCGCC
GAGGGTCAAC CACTCTATCT CATCGCGCTC GACCGGTTAC GGCGCGAAGG TGCATCGGGC
GCCACGGCGC TGCGCGGCAT CGCCGGGTTT GGCGCCGGGC ATCGCTTGCG CACTGCTGGC
ATCGCCGATT TCGGTCAGCA AACACCGATC ATTATCGAAT GGCTCGACCG CGCTGAGCGT
GTGGCGCGTG TGCTGCCCGC CCTCGATGAA CTGCTTGGCG AGGCGCTGAT TACAATTGAG
GACATCAGGG CGTATCGTGC CGCGCTGCGT TCAGGCGGTC CGTTTGGCAG TCGCTCGATT
GCCGATGTGG CGCGAGGCGA TATTATGACG GTTCCGCCGG ACTTGCCACT CGCGGCAGCC
CTTGATCGCC TGGCGCGCGC GCGCCAGCCA TTGCTCGCGG TCGTCGATGG ACAGCGATTG
ACCGGCATCC TTGTTCCCGA AGATGCGGGG CGCTTCGGCG TGATGCCGCT CGAGGCGTTG
GCGGAGCTCG ATGATGCCGA GCGTTCTGCG TCGCTGGCGC GTCTTGCTCT GCGCCCTGTG
CGCGATGCCA TGCGTGAGCC GCGCGCGATC TATATCGAAT CCCCTCTTGC CCATACCGTC
AATCTGCTCA TCGAATGGGG TCTCGATGCG CTTCCGGTGA CCGACAACGA AGGTCGTCTG
GTCGGGGTCT TTGGGGTCGA TCAGGCGCTG CGCGCGGCGC TCGATGGAGA ACGCGCCTCA
GGGCATGTGC GCAATGCCGA ACCGCCGCCG CCGGTCAGTC TGATCATGCA GATGCTGGTG
CCCACAGCGT CCGCCGGTGC TGATGCCGCT GCCGTCCTGC TTCAGACGCT TCAGTCTGCC
GCGCGGACGG TCGTGCTGAT GAATGGCTTT TACCCAACCG GCGTTGTGTC AGTCTCCGAA
GCCACGCGGC GCGTGCGTGA ACCGTTGCGC TCCGCCTGGA TCGCAGCGCT CATGGGTGAT
CGGTCGCCGC TTGCCACACT TGCTGCCGCT TCATCCAGCG GGACGACTGC TGACGATCTC
GCGGCGGCGC CGGCATTGAT CCCATCGCAC GCCAGCGAGT ACGATGCCAT TCGCATCCTG
ATCGAGGGCG AGAAGCAGTA TCTGGTGGTG GTCGACAGCG AAGGAAGACT GGCGGGCATG
GTCACCCGCC GTGGTCTGCT GCGCGCCCTG GCGCAGGAAG GGTAA
|
|---|
| Protein sequence | MTAGEPLQRV RIYLSERDSA EGQPLYLIAL DRLRREGASG ATALRGIAGF GAGHRLRTAG
IADFGQQTPI IIEWLDRAER VARVLPALDE LLGEALITIE DIRAYRAALR SGGPFGSRSI
ADVARGDIMT VPPDLPLAAA LDRLARARQP LLAVVDGQRL TGILVPEDAG RFGVMPLEAL
AELDDAERSA SLARLALRPV RDAMREPRAI YIESPLAHTV NLLIEWGLDA LPVTDNEGRL
VGVFGVDQAL RAALDGERAS GHVRNAEPPP PVSLIMQMLV PTASAGADAA AVLLQTLQSA
ARTVVLMNGF YPTGVVSVSE ATRRVREPLR SAWIAALMGD RSPLATLAAA SSSGTTADDL
AAAPALIPSH ASEYDAIRIL IEGEKQYLVV VDSEGRLAGM VTRRGLLRAL AQEG
|
|---|
| |