| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2207 |
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| Symbol | |
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| ID | 5539688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2849491 |
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| End bp | 2850420 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640894340 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001432308 |
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| Protein GI | 156742179 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.41699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.754235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTGA CGATTCCGAT AACCGATCCG GGCGTATCGT TGCGCGACGC GCTCACTGCT
GCACTCGGCA GCGAGGGTGA GGCGGCATGG CTGATCGCGC GCGGGGGAGT ATGGGTGAAT
GGAAGGCGTG TACGCGACCC GGATGTGCGG CTTCCGGTTG ACGCAACTGT CGTGGTTCAG
CGCCCGCCCG ACGGCATCTA CCGCGATCCG GTTGTGACGT CGGCAATGAT CCTGTATGAG
GACGCAGACC TGATCGCGCT CGATAAACCG ATAGACACCT ATGTCGAGGC GACGCCGTGG
GATGCAGAGG GGCACCTGCG CGCGGCGCTG GCGCATTTCC TGGAGGTGCG CGACGGTTCT
GCGCCGCCAT TACATCTGGC GCACCGCCTC GACCGGGACA CATCGGGCGT TCTCCTGCTC
TCGAAAGCGC CGGATGTCAA CGCAGCGCTG CAACGCGCTT TTCGAGAAGG AGCGGTGCGC
AAGACCTATC TGGCGCTCTG CGCCGGGCTG CCTGCCTTCG ACGAGATCGA GATCGAAACC
GGGCATGGGC GCGGACGTGG CGGCGTCTTC CGCGTCTTTC CGCATGAGGA GATCGGGCGC
GCGCTTCCAC AGGGTGGAAC GGTCAAAGCC ATGCGTACCC GCTTGCGCGT CGTTCGACGG
ATGGACGACG CGGCGCTGGC GTGCGCCACG CCCCTCACCG GTCGCACCCA TCAGATTCGC
CTGCACCTCG CCTTCCTGGG GCATCCGCTG ATCGGTGATG TCAAGTATGG CGGACCATCA
ACCTGGCGCG GCGTTGTTGT GCAACATCAT CACCTGCATG CATGGCGACT CGAATTACCG
CACCCGCGCA GCGGCACGGC GCTCATCATT GAGTCGCCGG CGCCGACATG GGCGAATCTT
CCTGATGCAA AGACGCTCCT CGCGCGCTGA
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| Protein sequence | MLVTIPITDP GVSLRDALTA ALGSEGEAAW LIARGGVWVN GRRVRDPDVR LPVDATVVVQ
RPPDGIYRDP VVTSAMILYE DADLIALDKP IDTYVEATPW DAEGHLRAAL AHFLEVRDGS
APPLHLAHRL DRDTSGVLLL SKAPDVNAAL QRAFREGAVR KTYLALCAGL PAFDEIEIET
GHGRGRGGVF RVFPHEEIGR ALPQGGTVKA MRTRLRVVRR MDDAALACAT PLTGRTHQIR
LHLAFLGHPL IGDVKYGGPS TWRGVVVQHH HLHAWRLELP HPRSGTALII ESPAPTWANL
PDAKTLLAR
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