| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2200 |
|---|
| Symbol | |
|---|
| ID | 5539681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2841907 |
|---|
| End bp | 2842773 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640894333 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_001432301 |
|---|
| Protein GI | 156742172 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG ATCACGTTCG CCTGAGCGCT TTTGGCGATG AAATCGCAGA CGATCTCACT
GAACAACTCG ACATGCTTCA ATCGGAGGGT ATCGGAGCAA TCGAGGTGCG CAAGGTTTGG
GGGAGAAACA TTCTCGATCT GGCGCCAGAT GATCTGCACC GTCTTCGTGA ACTGCTCGAC
GCGCGCGGCT TTGTTGTTTC GGCAATTGGC AGCCCAATCG GGAAATCGCC GATCACCGCG
CCACGTTCTT TTGAGCAGGA ACGCCTCGAA CGCGCCATTG TCGCCGCTGA GGCGCTTGGT
ACGCGCATCA TTCGAATCTT TTCATTCCAC CTGCCCGCCG ATAAGGCGCA TATTTATCGT
GATGAGGTGA TCGAACGCAT CACGGCGCTG ACGAAACGTG CTGCGGCGTC TGGGATATTA
CTGGTTCACG AAAACGAAAG CGGCATCTAT GGCGATACTG CGGAGCGCTG TCGCGACCTG
CTCGCTGCTA TTGGATCGCC CTCCCTGCGC GCTGCCTTTG ATCCGGCTAA TTTCGTTCAA
TGTCGGGTGC ATCCGATGCG TGACGCCTGG CCGCTTCTTG CTGATTTTGT TGTTCATGTC
CATATCAAGG ACGCTCTTTT TGCCGATGGA AGCGTGCGTC CGGCAGGCGA GGGAGATGGC
GATATTCCAT CTTTGCTGGC AGCCCTGCGT ATGCGCGACT ACCGCGGTTA TCTGACAATC
GAACCTCATT TGCAGGCTGT AGACGCTTCG GGCAATCTGA GCAGAGTGGA AGGCATGCGT
GTCGCTATTC GCGCTCTGCG TCGGTTGATG GAAGAATCCG CGCGCGTTCC GTTCCAAGCG
CTTCGACGAT TAGCCCCTGG CCCGTAA
|
|---|
| Protein sequence | MTTDHVRLSA FGDEIADDLT EQLDMLQSEG IGAIEVRKVW GRNILDLAPD DLHRLRELLD
ARGFVVSAIG SPIGKSPITA PRSFEQERLE RAIVAAEALG TRIIRIFSFH LPADKAHIYR
DEVIERITAL TKRAAASGIL LVHENESGIY GDTAERCRDL LAAIGSPSLR AAFDPANFVQ
CRVHPMRDAW PLLADFVVHV HIKDALFADG SVRPAGEGDG DIPSLLAALR MRDYRGYLTI
EPHLQAVDAS GNLSRVEGMR VAIRALRRLM EESARVPFQA LRRLAPGP
|
|---|
| |