Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2189 |
Symbol | |
ID | 5539670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2813143 |
End bp | 2814384 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640894322 |
Product | ATPase |
Protein accession | YP_001432290 |
Protein GI | 156742161 |
COG category | [R] General function prediction only |
COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.981542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATTT TCCGTCAAAT TCAGCATCGC CTGCCCGAAC CGACAACACG CCGCCTGGTA ATGATCACCG GAGCGCGGCA AACGGGCAAA ACCACGCTGG CGCGGCGTCT CTACGCGCAG TTGCGGCGCC TGTCGCTCGA CGAAGCCGAG GAGCGCATCC GACTGCGCGA ACTTCCCACA CGCGCCTGGG CGACGACCAT TGGCGAGGCA GTGCTCGATG AAGCGCAGAA GGAACCTGCT ATCTTCGAGA AGATCAAGTT CGCTTATGAT CAGGGCACGA TCAATTTCAG CGTGTTACTC GGATCATCGC AGATTGTCAT GCTCCAGCGC ATCCGGGAGA CGCTGGCTGG TCGCGTATTC ATGTACGAAT TATGGCCCCT GATGCTTTCA GAGCTGGTCG GCGGCGAGCA TCCGTCGCCG TTGACGCTGC TGGCGCGGTT GTGCGAGGAA GAGGGCGATG CCGATGCGCT CTTGAGTGAT CAACCGCCTG TTTTGCTAGG CGAGGAAGCG TATCGCCGCG CTTTCTGGTT CGACTACGGA CTGCGCTGGG GCGGGATGCC GGGATTGCTC GAACTGACGG ATAGCGATCG ACGGGACTGG CTGGCTTCTT ATGCCAACAC ATACCTGGAG CGCGATCTGG CAGATGTAGC GCGACTGGAT GAACTCGTGC CGTTCCGACG GTTTATGCGA CTGGCGGCGT TGCGATCCGG TCAGACGCTC TCCTATGCCG ACCTGGCGCG TGATGCAGAT ATCAGCCCTG GCACAGCGCG CAATTATCTG AACTATCTGC AACTCTCCTA CCAGGTTTTT TTGCTCCTGC CCTATGTTGA CAGTCCTGGC AAGCGACTGG TGAAATCGCC GAAACTCTAC TGGATCGATC CTGGACTGTG GCGCTATCAG ACAGGATATT GGGGCGACGC CAGCGGAGCG CTGCTCGAGA GTTATGTGGT TGGTGAATGC TTCAAATGGC TGCGAACCAC CGGTACGCAG GCTGAATGCT GGTTCTACCG CACCCACAGC GGTCTGGAAG TCGATCTGTT GTTATCCACG GCTTCCGGCA TATGGGGGAT TGAGGTCAAA TCCTCACCGG AAGTCAGATT GTCTCAGGCG ACGGCGCTAC GTCGCCTGGC AGCGGAGTTT GGGGCGCGCT GGCGCGGAGG ACTTGTCGCA TACCCTGGCG AGCGCTTGGA GCGGTTGGAC ACGAACCTGT GGGCTATGCC GATCACGCGC CTGTTCAGTT GA
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Protein sequence | MTIFRQIQHR LPEPTTRRLV MITGARQTGK TTLARRLYAQ LRRLSLDEAE ERIRLRELPT RAWATTIGEA VLDEAQKEPA IFEKIKFAYD QGTINFSVLL GSSQIVMLQR IRETLAGRVF MYELWPLMLS ELVGGEHPSP LTLLARLCEE EGDADALLSD QPPVLLGEEA YRRAFWFDYG LRWGGMPGLL ELTDSDRRDW LASYANTYLE RDLADVARLD ELVPFRRFMR LAALRSGQTL SYADLARDAD ISPGTARNYL NYLQLSYQVF LLLPYVDSPG KRLVKSPKLY WIDPGLWRYQ TGYWGDASGA LLESYVVGEC FKWLRTTGTQ AECWFYRTHS GLEVDLLLST ASGIWGIEVK SSPEVRLSQA TALRRLAAEF GARWRGGLVA YPGERLERLD TNLWAMPITR LFS
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