| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2168 |
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| Symbol | |
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| ID | 5539649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2785088 |
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| End bp | 2786113 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894302 |
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| Product | transcriptional regulator-like protein |
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| Protein accession | YP_001432270 |
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| Protein GI | 156742141 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.229743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000957386 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACGCC GGAGTGGCGG TATCAAGCGC AGTTCATGGG TGACTTTTCG CCGACGTTTG
TTTCTGGTGC GTCAGTTACT GCGATCGCCT GCAAGTGCGG AAGAGTTGAT CACCAGAGTA
CAGACGGAAC TCGGCGTCAA TGGATACCCG GCGAATGCAG CAGCAGCGCT CAAGCACGAT
CTGGATTCAC TCAAGGGAGA GTATGATTGC CGGATCGTTT ACCGACGCGA CCAGGGGAAG
TATGTCATTG TTGATCTGGG GGAACTGGCG TTGCTCGACC TGCCGCCGCA GAGCCTGGAA
GCGCTGGCGT TGCTTGATGC GAGTTATCCG GCAGGATCGG CAAACCCAAC GCATGCCAGC
ATTCGCGCCC TGATCGATCA GGTTATTCAG ATGCTTCCCA ATCGGGCGCA GACGCACCTG
CACGCGCGGC GGAGCGCCAC ACGCCAGAAG GCGCCATCCG GTCGTATCGA TCCCCATGTG
CTCGCTGCTG TGCGCCAGGC AATCGAGGAA AAACGTGAAC TGACGTTTCG TTACTGGGGC
TTGAGCAATG GTGAAGCGCC GCGACGGCAT CGCGTCGCTC CCTATGGTAT CTTCTTCCGC
AACAATGGGT GCACGTATCT CGACGCTACG CTGTTGGAGG TGCAACCGCC AGGCGCCGAG
CAATTGTTCG CTCCTGTTGA TTATCGGCTC GACCGCATCG TCCCCGGTAC AGCGCAGGTG
TTGCCAACCC CGCTGCCGCC GGAGCGACTG AGGGCGCCGG CATTGACGCT GCGATACTGG
CTGCATCCTG AGGTGGTGCA GCGAGGCGAG GGGTGGTCAT TTTTCCCCAA TGCGCATGTC
GAGTACAGCG ATGACGGGAG CGCACTGGTG ACTGCAACGG TTTCCAATCT TTCCGTTGCG
CGCGACGTGC TGTTGCGTTA CGGTGATCGC TGCCGTGTGA TCGAGCCGAC GGAGCTGATC
GACCTTATCC GAGAGACGGT GGACGCGATG GCGTCACTCT ATGGCAACCC GGTCGCTGTT
CGCTAA
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| Protein sequence | MARRSGGIKR SSWVTFRRRL FLVRQLLRSP ASAEELITRV QTELGVNGYP ANAAAALKHD
LDSLKGEYDC RIVYRRDQGK YVIVDLGELA LLDLPPQSLE ALALLDASYP AGSANPTHAS
IRALIDQVIQ MLPNRAQTHL HARRSATRQK APSGRIDPHV LAAVRQAIEE KRELTFRYWG
LSNGEAPRRH RVAPYGIFFR NNGCTYLDAT LLEVQPPGAE QLFAPVDYRL DRIVPGTAQV
LPTPLPPERL RAPALTLRYW LHPEVVQRGE GWSFFPNAHV EYSDDGSALV TATVSNLSVA
RDVLLRYGDR CRVIEPTELI DLIRETVDAM ASLYGNPVAV R
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