| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2130 |
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| Symbol | |
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| ID | 5539610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2739152 |
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| End bp | 2740018 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640894264 |
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| Product | CHAP domain-containing protein |
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| Protein accession | YP_001432233 |
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| Protein GI | 156742104 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3942] Surface antigen |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0066022 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0961309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGAA TCGGCGCCGA TCTCGAACAA CTTCGTGCGA CCATTGCCTC CCTTCGGCAG
GGTAATGCAA ACCTGCAAGA AACGTTTCAA CGGACGAGGC AAGCCATGCA AGCCTTGCAG
AGCAGCCCAT GGGCAGGTCG GCATCGCCAA CAAGCCGAAG CAGTCTGGGA GCGAATTCAG
GCTCAGTTTA CACCTGCGAT CAATGCGCTT GAAAACCTGA CTGCGCGCAC CGAGCAGTTT
GCTCACAATC TTGAGGCGGC AGGCAGCCGG TTTAACGATG GTGCAGCGAT TAGTTCTAAG
GCGCCAACCG CTCCAGGCGT CGATACGATG CCGAAATCGC CGCTCCCGCC AGGTGATGGC
GCGATAAATG GTCAGCAACC GCCGCCTTAT CGTCCGTTTG AAAGCGGACC CACGACCGTG
CCCGGCGTAT TGCAAGACAC GGCCGGTTGC ACCAACTACG TTTTACGGCG GGTCAATTTG
GATGATATGA AGAGGTGGCC CAATGCGCAT GAATGGAACG AAGCCGCTCG CAACGCCGGA
TATGTGATCA GCGACGTGCC AGAAGTAGGA TCGAAGGGGG CGATCATGGT ATTCGAGGCA
GGACTATTGA AGGGAGCCTA CTCCTCAGAC GGGCATGTGG CCTACGTGGA GCAAGTAGAG
CGCGATCCGG ATGGCACGCT GAGGGTGACC ATTAGTGAGG CAAAACCTGT TGAGAATAAC
GGTGAGATAG TTTGGGGTAC ACATACTCCG CCAACTACGC GCACTATCGC TCTGCGGGTT
GGTGAAGACG GAAAGGTGGC ATCGATTGAT GGCAACCCGA TATCTCCGAA TGATGTAAGT
TTCATCTTGG GCAGGCGTGC AATGTGA
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| Protein sequence | MARIGADLEQ LRATIASLRQ GNANLQETFQ RTRQAMQALQ SSPWAGRHRQ QAEAVWERIQ
AQFTPAINAL ENLTARTEQF AHNLEAAGSR FNDGAAISSK APTAPGVDTM PKSPLPPGDG
AINGQQPPPY RPFESGPTTV PGVLQDTAGC TNYVLRRVNL DDMKRWPNAH EWNEAARNAG
YVISDVPEVG SKGAIMVFEA GLLKGAYSSD GHVAYVEQVE RDPDGTLRVT ISEAKPVENN
GEIVWGTHTP PTTRTIALRV GEDGKVASID GNPISPNDVS FILGRRAM
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