| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2116 |
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| Symbol | |
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| ID | 5539596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2719087 |
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| End bp | 2720109 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640894250 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001432219 |
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| Protein GI | 156742090 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.326273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACA GCCAGGCAGA CTCGAAAGCG CAGCGACGTG GTGCGTGGAA TAGCGTCGGC
AGCAGCGTGT TCAGCGCCTT CCGTCGAAGT GACGCCAGCG TCGTGCTGGC GGTTCTATTC
CTGTTTGCAC TTTTTTCCCT GAGCAATCCC AGTTTTCTAA CCTCCTTCAA TCTCTTCAAC
ATCTCACGCA CGGCGGCATT GTTTGTCTTT ATCGCTTTGG GGCAGGCAAT CGTCATTGTT
GCTGGCGGCA TGAATCTGTC ACTCGGCGCC ATTGGCGGGC TGACCGTGGT GGTCGCCGGC
TGGTGCATGG ATACCATGGG TTGGTCGCCG TGGGTCGGCG TTTCTCTGGC ACTGCTGACC
GGCATGCTCT GCGGGATGTT CAATGGTTTC ATTGTTGTTA AGATGCGGCT GAATTCCTTT
GTGGTAACGC TGGCCAGCCT GTTTATTTTC ACCGGACTGA TTCAAGGCAT CTCGCAGGGC
TTCCCTTACT CAAACATTCC TAAAGAGTTC ACCATCCTGG GACGTGGCGA TTTTATCGGC
ATTCCCTACC TGCTCCTCCT GGCCCTTGTT GTACTGATGG TCATGGAATA TGTCTTCAAG
TTCCGTATCG TGGGACGCCA CCTCCTGGCT ACCGGCGGCA ACCCAGAGGC GGCACGTTTA
TCCGGTATTC GCACCGACCG TGTAATCTTT CTCAGCCATA CCCTCTCCGG GCTGTTTGCT
GCTATAGCCG GTCTGCTATG GGTTTCACGA ATGGGATCGG CGCAGCCTTC AACCGGCGCA
GACTGGCTCA TTATCTCGTT CGCGGTCGCT ATTATCGGAG GTACAGCTCT CAATGGCGGC
GCTTTCTCCG CCCTCGGCAT TCTGGCCAGC GCGCTTTTGC TCACATTGAT CAGAAACGGG
CTGATCATGC TCAACGTCAA TGTGTATTTT GAGCAAACAT TCCTGGGTCT CATTGTTTTG
CTGGCCGTCT CTATCGAAAG CATTCGCCAG GCATTAAACA AACATACCAA TCGTTCCCCT
TGA
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| Protein sequence | MSNSQADSKA QRRGAWNSVG SSVFSAFRRS DASVVLAVLF LFALFSLSNP SFLTSFNLFN
ISRTAALFVF IALGQAIVIV AGGMNLSLGA IGGLTVVVAG WCMDTMGWSP WVGVSLALLT
GMLCGMFNGF IVVKMRLNSF VVTLASLFIF TGLIQGISQG FPYSNIPKEF TILGRGDFIG
IPYLLLLALV VLMVMEYVFK FRIVGRHLLA TGGNPEAARL SGIRTDRVIF LSHTLSGLFA
AIAGLLWVSR MGSAQPSTGA DWLIISFAVA IIGGTALNGG AFSALGILAS ALLLTLIRNG
LIMLNVNVYF EQTFLGLIVL LAVSIESIRQ ALNKHTNRSP
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