| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1983 |
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| Symbol | |
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| ID | 5539461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2541533 |
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| End bp | 2542396 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640894118 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432089 |
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| Protein GI | 156741960 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5551] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.583532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTAT CGCTCATCTT CACCATTCGC CCGCTGGCGG CTGCGGAAAA ACCGGCATCA
CTCGGACGCG CAGCGCACGC CGCCATTCTG CGCCTGATCG GGGACAGTGA TCCGGCGCTT
GCGACCCGGC TCCACGACGA CGATGGACCC AAACCGTTGA CCGTCTCGAA TGTCATCGGT
CTGGAAGCGC GCCAGCATAT GGCGCGCGTC TATCCCGATC GTCGGTATCG GCTGCGGGTA
ACGTTATTGA CCCCGGCGCT CGAAGCGATT GCCGCCGCCT GGCGGCCCGC TGCGCTGGCG
CCGCTCGACC TCGACGGGCT GCTCTGGCGC ATCGAGCAGA TTACCGACAA CCCTGGCGAC
GATCCCTGGG CAGGGCGCGC CGCATATGAG GAATTGGCGA CGGCGCTCCT CGCTCGCCAC
GCCACATCCG CGCGCTGGAC CTTCGAGTTT GCAACGCCGG TCACCTTCCG GCAGCGCGGT
CTCAACCAGC CGCTGCCATT GCCGGCGCTG ACCTTCGGCA GCCTTCTCGA ACGCTGGAAC
GCCTTTGCGC CCATTGCCCT GCCCGATGAG ACGCGCCGAT TTGCCGAAGA GTGCATCGCC
GTAAGCCGCT TCGAACTGCG ATCACGCTCC GATCCGACGA AGGGTGGGGC GCCGCAGATC
GGCGCCATCG GTCGTGTGAC CTATGCCGCC GTCAACCGCG ACCGGTACTG GCTGGCGTGT
ATCGACGCGC TGGCGCACTT CACACTGTTC AGCGGTATCG GCGCCGGCGT CGCTCGCGGC
TATGGGCAGG CGCGCCTGCT GGACGACGAT CACACCGGCG CGCGTCCACA CACCACCGGG
CAGCCGGATG GGTTGTCCGC ATAA
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| Protein sequence | MPVSLIFTIR PLAAAEKPAS LGRAAHAAIL RLIGDSDPAL ATRLHDDDGP KPLTVSNVIG
LEARQHMARV YPDRRYRLRV TLLTPALEAI AAAWRPAALA PLDLDGLLWR IEQITDNPGD
DPWAGRAAYE ELATALLARH ATSARWTFEF ATPVTFRQRG LNQPLPLPAL TFGSLLERWN
AFAPIALPDE TRRFAEECIA VSRFELRSRS DPTKGGAPQI GAIGRVTYAA VNRDRYWLAC
IDALAHFTLF SGIGAGVARG YGQARLLDDD HTGARPHTTG QPDGLSA
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