| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1973 |
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| Symbol | |
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| ID | 5539451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2525747 |
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| End bp | 2527591 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640894108 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432079 |
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| Protein GI | 156741950 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02226] N-terminal double-transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTC TTCTGCCACT CGGATTACTG GCATTGCTTG CCCTGCCGCT CATCGTGCTG
CTCCATTTCC TGCGCGAACG GCGGCGACGC GTGCCAACAC CAAGCCTGCT GCTCTGGGCA
AACCTGCCAC GCCGCGTGGA AGGCGAGCGC AGCCGCCGCC TGCCGCTGAC CCTGCTGCTG
CTCCTCCACC TCCTGATTGC CACGCTGCTC GGCGTTGCGC TGGGGGGACC GCAGATCACC
GGTGCGCTCA CGCCCGACGC GCGCCATACC GCCATTATTC TCGACACATC CACCAGCATG
GCAGCCGTTG ACGGCGGCGC GAGCCGTTTC GACCAGGCGC GCCGGCGCGC ACGCGCTATT
GTCACCTCTG CCTCTCCCGG TGACCGGATC ACGCTGATCG CTGCCGGACC GCGGGCGCAG
ATCGTGGCAT CCGGCGACGA CCCCTTACTG ATCACTGCCG CGCTCGACCG CCTTCAGCCC
GGCGGCGTTG GCATGGCGAT CAATGAGGCG TTGACGCTGG CAGAAGCCGT GCTCGACCCA
CAGTTCAGCC GACGGATCGT GGTCCTGACC GATAGCGCGT TACCGCCGCA ACCTGCGCGC
GATATGATTG TGCCCATCGA ATGGGTGTCG ATAGGATCGA ATGTGCCGAA CCGCGCGATC
ATTGCGTTTG CCAGCCGTCC CTGGGGCGGT CGCCTCCAGG TGTATGCGCG GGTCGCCAAT
TATGACGCCA CAGCCTTCAA TGGAACGCTC CAGGTCTTCT CCGACAATCA GGTCGTTGCA
GAAGAACGAG TCGCCATTGC GCCGAACGGC GAAACGGAGG TCAGTTGGAC GCTGCCCGGC
GGAATTGAGG CGCTGCGCGC CACCATCGAT GGGCGCGATG CGCTGCCACA GGACGATGTC
GCATACCTCA GCGTGTCGCA GGGGCGCCCG ATTCTGGCGT TGCTGGTGTC GAACGAGCCG
GCCGCCCTTC GCCGCGCGCT CGCAGCCATA CCCGGCGTGA CGGTCGTTGT GACGAACCCT
GCCGCCTACG CGGACACGCC GGAGCGATCT GCCGCAGACC TGACAATCTT CGATGGTTTT
CTGCCGGATG CCTGGCCCCA GGGCGCTATT CTGTCAATCG CCCCACCCTC TGGATCGTCG
CTGTTGAATG TAGCGTCCGA CACACGCGAA CCAGAACCGG GCAAGCCGTT GCACCAACGA
GGGAATACGC TCCAGGGGAT CGAGTTCGGC GGCGTGGTGT TTGGCGCCGT CCGCATCGTC
GAGGCGCCAC CATGGGCTGA GGTGCAGTTG TCGTTCGAGA ATACGCCGCT GATCCTCCGA
GGACGAACCG ACAATCACGA AATTGCGATC TGGACGTTCA ATCTTGCCAG CAGCAACCTG
ACGACACGCC TGGCATTTCC GATCCTGGTT GCGCGCACCG TGCGCGACCT GGCGCCACCG
CCGTTGCCGC AGGCGGTGCG CGCCGGCGAG CCACTGGTCA TCCGACCCGA CCCGCGCACG
ACAACCCTGC GACTGCGTGG TCCTGACAAC CGGCAGATTA CCGCGCCGGC AGCATCGGTT
GTCACCCTCG ATACGCTGAT CGAGCCGGGG TTGTACCGCG TGGAAGAACA ACGCAACAAT
ATCACCGTTC CGGTTGGCAT GGTCGGAGTC AATGCAGGAG CGGCAATCGA ATCAAACCTG
CGCCCACAGA ACGCACCGCC GTTGCGTGCG CCGGGAACCG ACCCCGGCAG CGCAGCGGGA
CGACAGACGC TCGATCTATG GCCCTGGCTG GCGCTGGCTG CGCTCCTGGT TCTGGCGCTG
GAATGGGCGT ATGTGTTGCG CCGACGCGAG AAAGTGTTCA CATGA
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| Protein sequence | MSFLLPLGLL ALLALPLIVL LHFLRERRRR VPTPSLLLWA NLPRRVEGER SRRLPLTLLL
LLHLLIATLL GVALGGPQIT GALTPDARHT AIILDTSTSM AAVDGGASRF DQARRRARAI
VTSASPGDRI TLIAAGPRAQ IVASGDDPLL ITAALDRLQP GGVGMAINEA LTLAEAVLDP
QFSRRIVVLT DSALPPQPAR DMIVPIEWVS IGSNVPNRAI IAFASRPWGG RLQVYARVAN
YDATAFNGTL QVFSDNQVVA EERVAIAPNG ETEVSWTLPG GIEALRATID GRDALPQDDV
AYLSVSQGRP ILALLVSNEP AALRRALAAI PGVTVVVTNP AAYADTPERS AADLTIFDGF
LPDAWPQGAI LSIAPPSGSS LLNVASDTRE PEPGKPLHQR GNTLQGIEFG GVVFGAVRIV
EAPPWAEVQL SFENTPLILR GRTDNHEIAI WTFNLASSNL TTRLAFPILV ARTVRDLAPP
PLPQAVRAGE PLVIRPDPRT TTLRLRGPDN RQITAPAASV VTLDTLIEPG LYRVEEQRNN
ITVPVGMVGV NAGAAIESNL RPQNAPPLRA PGTDPGSAAG RQTLDLWPWL ALAALLVLAL
EWAYVLRRRE KVFT
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