| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1972 |
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| Symbol | |
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| ID | 5539450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2523207 |
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| End bp | 2525750 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640894107 |
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| Product | von Willebrand factor type A |
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| Protein accession | YP_001432078 |
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| Protein GI | 156741949 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1240] Mg-chelatase subunit ChlD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.865773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTTC GCAACCCGCA GTTTCTCCTG CTCCTGATGC TCGTGCCGCT GATCATCGGC
GGTTGGCTGT GGCGGCGTGG TCGCCTGCCG GCTGCGGCGC TCGTGCTGCG CGTGATCATT
GTGATCCTCA TTGTCGGCGC GCTGACCAAC CCGATTGCCC TGCAAGGGCA TATCGACAGC
GCAGGTGCGC CGCTCGTCGT GGTGCTGGTC GATCAATCGG ACAGCCTGAC CGACGAAGGC
AAAGCAGCGT TGCGCGCGCG CGCTGCGGCG CTTGCCGCAA ACAGCAGCAG CCCGGTGCAA
ATTATCACGT TCGGAGCAAC AGCAGCCGCA GAACAGAGCA CCCCCCCCGG CGATCAAACC
GATATCGCCG CAGCGTTGCG CGCCGCGCGC GGATTGATCG GCGACGGCGG CGGGCGCGTG
GCGCTCCTCT CAGACGGACT CCAGACCAGA GGCGATGCGC TGGCTGAGGC AAGAGCGCTC
GCAGGCGCCG GCATCCCGGT CGATACTGAA TATTATCAGG CGCCTGCACG ACCAGAGTTC
TGGATTGCAA CCATCGAAAC GCCGCCGACA TTGCGCGAAG GCGAAGAGTT TACCGCCCGA
ATCGTCATGG CCAGCACCGT CGCTGCCAAC GCGCAACTCG AACTGACCGT CGGCAATGAG
CGCGTGCTGG CGCAGCAGGT GCGCCTGGCG CCAGGTGAGA ACAGTGTCCC CTACACCGGT
CGCGCGGGGC GACCGGGCAT TCTGCGGATG CAGGCCACGC TGACCGGTCA ACCGGATACG
CTGACGCGCA ACAATGTTGC CGGTGCGACG GTGCTGGTGG CGCCGATGCC GCGCATTCTG
CTGGTGGAAG GACCGAACGA CGTCAACAGT GCGCCATTGC GCAGCGCATT GCGTGAGGCT
GGTGTAATGG CGGATGTGGC GGAGGCGGCA TCGCTCCCCG CACAGATCTC GGCGCTCGGA
TTGTATGAAG GGATTGTACT GATCGATGTG CCTGCCGGTG TCTTGAGCCT CGACCAGATG
GCAACGCTGC GTGAGTTCGT GCGCAGCGAG GGGCGCGGGT TGCTGGCAAT CGGCGGGCGA
TCCAGTTTCA CCCTTGGCGC TTATAAGGAC ACGCCACTGG AGGAAACGCT CCCCGTAACC
ATGGTTCCGC CGCCGCGTCC CGAACGCTCC GATACGACAC TGCTCCTGAT CATCGATCAG
TCCGCCAGCA TGGGACCGGA GACCGGCCTT TCCAAATTCA CCATGGCGAA GGAAGCCGCC
ATCATGGCGA CCGAATCGTT GCGCGCCGAG GATCGTATTG GCGTGCTGGC GTTCGATGTA
TCGACACGCT GGGTGGTCGA CTTTCAGCCG GTCGGAACGG GGTTAAGCCT GGCGGATATT
CAGCGACGGA TCAGCACGCT GCCGCTTGGC GGCGGCACCG ACATTTACAA CGCATTGCAA
ACCGGTCTGC CGGAGTTGGC GCGCCAACCG GGGCGGGTGC GTCATGCTGT GCTCCTTACC
GACGGTCGCT CCTTTACCGA TGATCGACAG GCGTATCAGG CGCTGATCGA GGAGGCGCGC
AGCCGGAATA TCACGCTTTC GACCATCGCA ATCGGAACTG ACGCGGATAT CGACCTGCTC
CAGACGCTGG CGCGCTGGGG CGCCGGGCGC TACTACTTCG CTGCCGAACC GGGCGATATT
CCACGCCTGA CGCTGCTCGA AAGCGAAATC GTGCGCACCG AGCCGCAGGT CGAAGGAGAT
TTCCGCGCTG AACAAAAGGC GCCCCACCCG ATGCTGCGCG ATTTTGCCCC GGCACAGATA
CCCGGACTGA AGGGGTATGT CGCCACAACC CTGAAACCCG GCGCCGACCT GGTGCTGCAA
TCGCCCGACG GCGATCCCGT GCTGGCGGTC TGGCAGTATG GATTGGGACG CGCCGCTGCC
TGGACGCCGG GCGCAGAAGC GCCATGGGCT GCCGATTGGT CGAACTGGCC CGAATATGGG
CGCTTTTGGG CGCAGTTGAT CCGCTACACG CTTCCCGAAC CGGATAGTGG ACCGCTCCAG
GTGCGCGTCG TCCGCGACGG TGATAGCGTG CGCATCGTGG CCGATTCGGT CGCGCCGGGA
GGCAGACCGC TCGACCTGGC AGACACTCAG GCAACGATTG TGCTGCCCAA CGGCGCCGCG
CAACTGATTA CGCTGCGTCA GACGGCGCCA GGTCGCTATG AACAGGCGCT CATCCTGCCG
GACGACGGAC CCTACGCAAT TGAAGTGCGT CAGCAAAAAG GGAGCGAGGT GCGCGCAGCG
CAGGCCGGCT ACGTGCAACG CTACTCCGAC GAATACCTGC CCCCCGCCGA TCCGCAGACC
GGTGCGCGGC TGATGAACGA CATCAGCGCA ATCACCGGCG GGAATGCACT GGGCGGAGGC
TCACTCATCG CGCCGGGAGG CGGCGCCATC CGCGCCGAAC GGCTGCCCGA CACCGGCTTC
TGGCCCTGGC TGCTTGGTCT GGCGGCGCTG CTCTGGCCCC TCGAAATCGC CATCCGGCGC
GGATGGGTGC GGTTGCGTCG ATGA
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| Protein sequence | MILRNPQFLL LLMLVPLIIG GWLWRRGRLP AAALVLRVII VILIVGALTN PIALQGHIDS
AGAPLVVVLV DQSDSLTDEG KAALRARAAA LAANSSSPVQ IITFGATAAA EQSTPPGDQT
DIAAALRAAR GLIGDGGGRV ALLSDGLQTR GDALAEARAL AGAGIPVDTE YYQAPARPEF
WIATIETPPT LREGEEFTAR IVMASTVAAN AQLELTVGNE RVLAQQVRLA PGENSVPYTG
RAGRPGILRM QATLTGQPDT LTRNNVAGAT VLVAPMPRIL LVEGPNDVNS APLRSALREA
GVMADVAEAA SLPAQISALG LYEGIVLIDV PAGVLSLDQM ATLREFVRSE GRGLLAIGGR
SSFTLGAYKD TPLEETLPVT MVPPPRPERS DTTLLLIIDQ SASMGPETGL SKFTMAKEAA
IMATESLRAE DRIGVLAFDV STRWVVDFQP VGTGLSLADI QRRISTLPLG GGTDIYNALQ
TGLPELARQP GRVRHAVLLT DGRSFTDDRQ AYQALIEEAR SRNITLSTIA IGTDADIDLL
QTLARWGAGR YYFAAEPGDI PRLTLLESEI VRTEPQVEGD FRAEQKAPHP MLRDFAPAQI
PGLKGYVATT LKPGADLVLQ SPDGDPVLAV WQYGLGRAAA WTPGAEAPWA ADWSNWPEYG
RFWAQLIRYT LPEPDSGPLQ VRVVRDGDSV RIVADSVAPG GRPLDLADTQ ATIVLPNGAA
QLITLRQTAP GRYEQALILP DDGPYAIEVR QQKGSEVRAA QAGYVQRYSD EYLPPADPQT
GARLMNDISA ITGGNALGGG SLIAPGGGAI RAERLPDTGF WPWLLGLAAL LWPLEIAIRR
GWVRLRR
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