| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1971 |
|---|
| Symbol | |
|---|
| ID | 5539449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2522019 |
|---|
| End bp | 2522876 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640894106 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_001432077 |
|---|
| Protein GI | 156741948 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGA CCGATACTGA AACGCTCCTG CACAACGCCG TTCCAGCGAT CCCCGCGAAT
CGCAATGCGC TGGGAAAAGA ACTGATTTAT CGAACACTGG TGCTGCCCGC GTGCCGCTCG
ATGTTCGCCC GGGTCTGGTT GCACATCGCA GGACCTGTGC CCCATCCTGC CGAAGGTCCC
GTTATCGTCT ATATGAACCA TCCCGGCTGG TGGGACGGGT ATATGGCGTT CCTGCTGGAT
AAAATCGTGC TGAACGAGCG ATTTCAGAGT TACATTATGA TGGAAGAGAA GCAGTTGCGC
ATCTACCGAT TCTTCACCTG GTGCGGCGCT TTCTCAGTAG ACCGGCGTCG TCCCGGCGAA
GCGGAGCGCT CAATCGCGTA CATCAGCCGC CTGCTGCGTG AACGGCGGGA CCGGATGCTC
TGGATTCTGC CGCAGGGGCG CATTGTTCCC AATGACCGCC GACCGTTGAA GGTCTACCCT
GGCGTGGCGC GTATTGCGAA ACAGGTGGGA GATGTATTCT TCTGGCCCGT TGCACTGCGC
TATGAGTTTC GCGGCGAGCA ACGCCCCGAA GCGTTTATTC GCGTCGGTCC CCCGCACATC
AGCGATCTGA GCGCGCCAGA AGCGGCGATT GTGGCTGACG TGCAGGCGCG CCTGACGGCG
GCGGTCGACG CATTGCGCGA CGAGGTCAAT GAAGAGCGAC TGGAAGCGTA CCGCACCCTG
TTGCGCGGGA AGCGCGACAT CAGCCGTTTC TGGGCTGATG TCGTCGCTGT GTGGCGCCAA
TCCATCCAGC GACTGCCAGG AAGATCACGC CGACCAGACC TGCCAGCGGA TAGCCACGCG
CCAGATTCGC AGCAGTGA
|
|---|
| Protein sequence | MTTTDTETLL HNAVPAIPAN RNALGKELIY RTLVLPACRS MFARVWLHIA GPVPHPAEGP
VIVYMNHPGW WDGYMAFLLD KIVLNERFQS YIMMEEKQLR IYRFFTWCGA FSVDRRRPGE
AERSIAYISR LLRERRDRML WILPQGRIVP NDRRPLKVYP GVARIAKQVG DVFFWPVALR
YEFRGEQRPE AFIRVGPPHI SDLSAPEAAI VADVQARLTA AVDALRDEVN EERLEAYRTL
LRGKRDISRF WADVVAVWRQ SIQRLPGRSR RPDLPADSHA PDSQQ
|
|---|
| |