Gene Rcas_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1962 
Symbol 
ID5539440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2512057 
End bp2512479 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content61% 
IMG OID640894097 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001432068 
Protein GI156741939 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.391056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCC GCGTTGCGAC AGCCGCCGAT GCCCAGGCGC TCGCGTGGCT GAATGCCACA 
TTCAACGGCG TTCAGATGTC GCCGCAGCGC ATGGCGGAGC AACTTGCCCG GTGCAGCGGC
ATCGAATCCG CGCTGATTGC ATACCATGGC GACGATGCTA TTGGCTTCGC GTGCCTGCGC
CTGATACCCT GGCTCTGTTA TGATGTGATG TATGCGGAAC TGACCGAGCT GTTCGTGGTT
GAAGCGTTCC GACGGCGCGG TGTGGCATCG GCGCTCGTGG CGCGCGCCGA ACGGATGGCG
CGCGCGGCAG GCGCCACAGA ACTGCGCATC CTGACCGGGC GCGACAATGT TGCCGCGCAG
GCATTCTACC AGGCATTGGG ATACGAAGAC GAAGATGAAA TGCTGATGAT ACGACATCTC
TAA
 
Protein sequence
MEIRVATAAD AQALAWLNAT FNGVQMSPQR MAEQLARCSG IESALIAYHG DDAIGFACLR 
LIPWLCYDVM YAELTELFVV EAFRRRGVAS ALVARAERMA RAAGATELRI LTGRDNVAAQ
AFYQALGYED EDEMLMIRHL