| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1958 |
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| Symbol | |
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| ID | 5539436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2508683 |
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| End bp | 2509069 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640894093 |
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| Product | HEPN domain-containing protein |
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| Protein accession | YP_001432064 |
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| Protein GI | 156741935 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.704012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATCCGC TCACAGCAGA GTGGATCAGT AAAGCCAAGG GTGACTTCGC CACTGCGCAA
CGCGAGTTGC GCGCACGCAG TTCCCCGAAT TATGATGCCG CTTGTTTCCC TGCGCAACAG
TGTGTGGAGA AGTATCTCAA AACGCGCCTT CAAGAAGCAG GACAGGTTAT TCCGCGCACC
CACGATCTCG TGGTGTTGTT GAACCTGCTG CTGCCTGTCG AGCCTGCCTG GACGCACCTG
GCTTCCGATC TTCGGGCGCG TACAGTCTTC GGCGAAGCGT TCCGCTATCC GGGTTCATCT
GCCGACCGTA CAATGGCGCG TGATGCAGTA AGGCGATGTG CTGCTGTACG AAAAGCGGTG
CGCCAGTCAT TTGGACTGTC GGTCTAA
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| Protein sequence | MHPLTAEWIS KAKGDFATAQ RELRARSSPN YDAACFPAQQ CVEKYLKTRL QEAGQVIPRT
HDLVVLLNLL LPVEPAWTHL ASDLRARTVF GEAFRYPGSS ADRTMARDAV RRCAAVRKAV
RQSFGLSV
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