Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1948 |
Symbol | trpA |
ID | 5539426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2497155 |
End bp | 2497940 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640894084 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_001432055 |
Protein GI | 156741926 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.54556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCA TTGCCGATAC CTTTGCCCGA TTGCGCGCTG CCGGTCGCAC AGCGCTGATG CCTTATCTGA TGACCGGCTA TCCCGAGCGC GATTCGGTGC TGGACCTTGC GCCGGCGCTG GAGGATGCCG GCGCCGATCT GTTCGAGCTT GGCGTCCCGT TTTCCGATCC GCTCGCCGAT GGCGCGACGA TTCAACGCGC TTCTGAACGC GCGCTTGCGA ATGGTGTTCG TCTCGAGCAC TGCATTGCAA CCATTGCCGT ATTGCGCGAA CGTGGCGTGC GCGCGCCGAT TGTGCCAATG GGGTATTACA ACCCGTTTTT GCAGTATGGT CTCGCGCGTC TGGCGCGCGA TATGGCAGCC GCCGGCGCGG ATGGGTTGAT TATCCCTGAT TTGCCGCCGG AAGAAGCGCA GGAGTGTCAC GCCGCCTGCC GCGAATATGG TCTCGATCTG ATCTTCTTCG TCGCACCCAC GACCCCTGAT GAGCGCATTG CCCGCATTAC TGCGCTCGCC AGCGGTTTCA TCTATTGCGT TTCGCTGACC GGCGTCACCG GCGCGCGGCG CGAATTGTGG AGCGGACTGC CCGCCTTCCT GGAACGGGTG CGGCGTCACA CCACCCTGCC GCTCGTTGTC GGGTTCGGCA TCAGCAGCGC CGATCATGTG CGTGAGGTCG GCAGGCATGC GGCAGGTGCG ATTGTCGCCA GTGCGCTGAT CAACGTTATC GAACAGTCGC ATCCTGGCGA ATATGTCGCG CGCGCGGCTG AGTTCGTGCG GTTGTTGCGC GGCTGA
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Protein sequence | MSRIADTFAR LRAAGRTALM PYLMTGYPER DSVLDLAPAL EDAGADLFEL GVPFSDPLAD GATIQRASER ALANGVRLEH CIATIAVLRE RGVRAPIVPM GYYNPFLQYG LARLARDMAA AGADGLIIPD LPPEEAQECH AACREYGLDL IFFVAPTTPD ERIARITALA SGFIYCVSLT GVTGARRELW SGLPAFLERV RRHTTLPLVV GFGISSADHV REVGRHAAGA IVASALINVI EQSHPGEYVA RAAEFVRLLR G
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