| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1925 |
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| Symbol | |
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| ID | 5539403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2466814 |
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| End bp | 2467428 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640894062 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001432033 |
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| Protein GI | 156741904 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00015523 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAGCG CCGCCGCGCG CGGATCGACC AGACGCCCGG CGGCGGAAGC GGGAACGGCG
GCAGAGGCGC TGGCGCGTCT GGCAGCCGAG CGTCCGGCAG TGGCGGTAAT CGACGTCCAG
TTGGGCGACG GCTGCGGGAT CGACCTTGGG CGCCGCATCG TGGCGCAGAC GCCGTGCGCA
GTGGTGCTGC TGACCGCGTT CGACTGGGAT GTCTATCTGG TGCAGGCATG GGAGGCGGGC
GCGGCGGCGT TTATCGCCAA GAGCGCTGAG ACCGAGGCGC TGGTCGCGGC GATCTGGAAA
GCGGCTGACG GCGAACGCGC CTTCAGCGAC GCGCAGCGGG CGCGCATCGC CGCCTGGCGG
CGCGACGTAG CAGGGCGCCT GGCGCTGCTG AGCGACCGCG AATACGCCGT GCTGCGCCTG
CTGGCGGAGG GCGCGACCAA TCGAGAGATC GCCGCAGAGC TGGGGCTGGC GGTCAAGACG
GTCGAAGCGC ACGTCCACGG GGTGCTGCAC AAACTGCGCC AGTCATCGCG GCGCGCGGTG
CAGGTTTGGG CGCAGCAGCA CCGGATTATC GCATATGGGA GACCGGATGC GCAGCAGAGC
CGATCCTCGG AATGA
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| Protein sequence | MDSAAARGST RRPAAEAGTA AEALARLAAE RPAVAVIDVQ LGDGCGIDLG RRIVAQTPCA
VVLLTAFDWD VYLVQAWEAG AAAFIAKSAE TEALVAAIWK AADGERAFSD AQRARIAAWR
RDVAGRLALL SDREYAVLRL LAEGATNREI AAELGLAVKT VEAHVHGVLH KLRQSSRRAV
QVWAQQHRII AYGRPDAQQS RSSE
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