| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1840 |
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| Symbol | |
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| ID | 5539318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2349683 |
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| End bp | 2351029 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893978 |
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| Product | peptidase M20 |
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| Protein accession | YP_001431949 |
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| Protein GI | 156741820 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGTT TCGATGCGCA CATTGAGGAA AACAAGGGGC GCTACTTCGA CGAACTTTGT
GCGCTGTTGC GTCAGCCGTC GATTGCGGCG CAGGGAATCG GCATTGAAGA GACGGCGACG
CTGGTCACAC AGCGTCTCGA GCGACTCGGT GCGCAGGTGC AGGTTTTTCA CATGCCTGGC
GCTGCGCCAG TAGTGTACGG CAGCATTGGT CACGGCAATC GCACACTGCT GATCTACGAC
CACTACGACG TTCAACCGCC AGAACCGCTC GATCTCTGGC ATTCGCCACC ATTCGAACCG
ATGCTGCGCG ACGGTAAACT ATATGCGCGC GGCGTCGCCG ACAACAAAGG CAACCTGATG
CTGCGCATCC AGGCAATCGA GTCGTGGCTG GCGGCGTATG GCGCCCTTCC CTGCCGCGTC
AACTTTCTGA TCGAAGGGGA AGAAGAGATC GGCTCGATCA ACCTCGAAGC CTTCTGTCAG
AGCCACCCCG ATTTGCTGCG CGCCGACGGG TGTCTGTGGG AAACCGGCGG CGTGAACGCC
CTCGAGCAAC CGACGATCAT GTGCGGCGCA AAGGGCATCT GCTATGTCGA ACTAGTCGTG
CGCGGCGCAT CGCACGATCT GCACTCCGCC AATGCAACGA TGGTCCCCAA CCCCGCGTGG
CGGCTCACGT GGGCGCTGGC GACGCTCAAA GCACCCGATG AGCGGGTGCT GATCCCCGGT
TTCTACGACT GGGTGCGCCC GCCGTCGGCA GCGGACATGG CAGCGCTGGA ACGCATTCCG
CTCGACGACG AGGAACTGCT GGCGGATTTC GGCATCCCGC AGTTCCTTGG CGGGCTGCGC
GGCATCGAGC GTCTAAAGGC GCACCTCTTC AACCCTACCT GCACCATCTG CGGACTGATC
TCCGGCTACA CCGGCGAAGG TTCGAAGACG GTGCTGCCAT CCGAGGCGCG CGCCAAAATC
GATTTCCGCC TCGTGCCCGA TATGGACCCG GCGGACGTGG TGGCGGCGTT GCGCCGTCAT
CTTGATGCGC ACGGCTTCGA CGACATCGCT ATTATCGAGT ACGGGCACGA AAAACCGGGG
CGCTCCGACC CCGACTCGCA CGTCGTCCAG GCAATGGCGA CGGCAATTCG CGCCACGTAC
CACATGGACC CAATCATTTA CCCGACAATG GCAGGCACCG GTCCGGTCTA TCCAGTCTGC
ACAGCGGCGG GAACGCCGAT GACGACGGGG TGCGGCACAG GGTATCAGGG ATCGCTGGTC
CATGCGCCGA ATGAAAACAT CCGGCTGGAC GACTACTGGA CGGCGATGCG CTGTATGGGG
GCGTTCCTTC AGGCGTTTGC GGCATAG
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| Protein sequence | MDRFDAHIEE NKGRYFDELC ALLRQPSIAA QGIGIEETAT LVTQRLERLG AQVQVFHMPG
AAPVVYGSIG HGNRTLLIYD HYDVQPPEPL DLWHSPPFEP MLRDGKLYAR GVADNKGNLM
LRIQAIESWL AAYGALPCRV NFLIEGEEEI GSINLEAFCQ SHPDLLRADG CLWETGGVNA
LEQPTIMCGA KGICYVELVV RGASHDLHSA NATMVPNPAW RLTWALATLK APDERVLIPG
FYDWVRPPSA ADMAALERIP LDDEELLADF GIPQFLGGLR GIERLKAHLF NPTCTICGLI
SGYTGEGSKT VLPSEARAKI DFRLVPDMDP ADVVAALRRH LDAHGFDDIA IIEYGHEKPG
RSDPDSHVVQ AMATAIRATY HMDPIIYPTM AGTGPVYPVC TAAGTPMTTG CGTGYQGSLV
HAPNENIRLD DYWTAMRCMG AFLQAFAA
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