| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1744 |
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| Symbol | |
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| ID | 5539222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2247172 |
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| End bp | 2248611 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893883 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001431854 |
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| Protein GI | 156741725 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.853827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACG CTGTGGAGCA AACATCAAAA GTGATGGATA TTCATGAACA GGCGATCACA
GACCTCCTGG CGCAGGCGGA AGGCGAGCGC GTGGCATGCG TGCGGGCGAA TGTTCGTCCC
ATCGATCTGG CGCAAACCAT GGCGGCAATG GCGAATGCCT CCGGCGGGAC GATCTTGATC
GGCGTGCGTG GGCGTCAGGT CGAAGGGGTG GCAGATGTGG ACGCTGCGCG AGCGATGGCG
TTCGACGCGG CGCTGGCATG TCTGCCGCCG CTCGTCCTTC CGCTGCCGGT CGTTGTCACA
CACAATGGCG CCACGCTGCT GATTGTCACC GTTCCTTCAG GATTGCCCCA TGTCTACAGC
GTCGGTGGAA CCTACCTGCG GCGGGAAGGT TCTGCGAATG TGCCGCTTGC TCCCGATGCC
TTGCGACACC TTCTGATTGA GCGGGGCGAA ACAAGTTGGG ACCGGATGGC GCCGCCGGAT
GCAACGCTCG CCGATCTGGA TGCTGAAAAG ATCGCCGCCT ACGCACGACG TGTTGGTCCT
ATCGCTGAAG CCGATCCGCT GGCATTTCTG CTCCGGCGCG GCTGTCTGAT GCAGCGCAGC
GGCACCGCTA CCGGTAAGAC CGAATTCGTG CCCACCAACG CCGGTCTCCT CCTCTTCGGC
GTCGAAATCG AGCGCTGGTT TCCACAGGCA GAAGTGACGC TGGTGCGCTA TCAGGGACGA
GAGATGAGCG ACGCATTTCT GCGTGAAGAT ATCCGCGACA CGCTGCCGGA AACAGCCCGC
CGCGCCGAAC GCTGGCTGAT AGAACATATG CGCCGTGGTA GCCGCATGGT CGGGTTGGAA
CGGGAGGACT GGACGCAATT CCCGTTGGGT GCGGTCCGCG AAGCGTTGAT CAATGCGCTG
GCGCACCGCG ATTACACGAT CCGTGGCGAC TCCATTCGCG TCCTGCTCTT CAGCGACCGT
CTGGAATGTT ATTCGCCGGG GCGTTTGCCG GGACATGTCA CGCTTCAGAA CCTGGTCGAA
GAGCGCTTTA GCCGGAACGC AACGCTGGTG CAGGCGCTGG CGGACCTGGG GTTGATCGAG
CGGCTTGGTT ATGGCATCGA CCGCATGCTG CGTCAAATGG CCGACGCTGG CTTGCCGCCG
CCGGAGTTCC GCGAGACGAC TGCCGGATTT CTGGTCACGC TCTATGGGCG CACCGGCGAC
GACCGCGCCG ATGCCGGCGG CGCCGATGTC GCCGCCTGGC GGCGCATGGG GCTGAACGAG
CGGCAGATTG CGGCGCTGCT CTTTCTCGCA GAGCATCAGC GCATCACCAA CCGCGACATG
CAGGAACTTG CGCCGGATGT CTCTGCCGAA ACACTGCGTC GTGACCTCGT CGATCTGGTC
GAACGCGGGT TGCTGTTGCG CGTCGGCGAC AAACGTGGCG CGTACTATAT TCTGAAGTGA
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| Protein sequence | MFDAVEQTSK VMDIHEQAIT DLLAQAEGER VACVRANVRP IDLAQTMAAM ANASGGTILI
GVRGRQVEGV ADVDAARAMA FDAALACLPP LVLPLPVVVT HNGATLLIVT VPSGLPHVYS
VGGTYLRREG SANVPLAPDA LRHLLIERGE TSWDRMAPPD ATLADLDAEK IAAYARRVGP
IAEADPLAFL LRRGCLMQRS GTATGKTEFV PTNAGLLLFG VEIERWFPQA EVTLVRYQGR
EMSDAFLRED IRDTLPETAR RAERWLIEHM RRGSRMVGLE REDWTQFPLG AVREALINAL
AHRDYTIRGD SIRVLLFSDR LECYSPGRLP GHVTLQNLVE ERFSRNATLV QALADLGLIE
RLGYGIDRML RQMADAGLPP PEFRETTAGF LVTLYGRTGD DRADAGGADV AAWRRMGLNE
RQIAALLFLA EHQRITNRDM QELAPDVSAE TLRRDLVDLV ERGLLLRVGD KRGAYYILK
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